Gene Phep_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3230 
Symbol 
ID8254349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3835524 
End bp3836609 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID644936883 
Producthypothetical protein 
Protein accessionYP_003093487 
Protein GI255533115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.100275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGG CCCATAAACA CACACTTAAA AAGTTTATAC TGCTCTTTGC CCTATCGGCA 
ATGGTGTATG TTTTTGGGTT TTTCCCCCGG CTGGTAGAAC CCCTGTATTC AGAAGGATTT
TACAGCCTGA CCTCAGTCAT ACAGCGATTT ATAAGCGGGA TATTCCCATT CGCCCTCGGC
GATTTTTTGT ACCTGCTGCT CATCTTGTAT ACAGCCCGTT CCTTATACCG TTTTTATAAA
AAAATAATAC AGAAACGTTT ACAGCAAAGC GACAGGTTGC ATGTCCCTTT ACAGGTACTT
AACTTTACAC TTGTATTATA CCTGCTTTTT AAAGGCTTAT GGGGCCTAAA TTATTCACGC
ATCCCTATAG CAAGGCAGCT GGGCATAAGC AACGAAAAAT ACAACACCGA AGAGCTGGTA
TTACTGGGTA AATACTTTAT TGCGCGGTTA AATAACCTTC AACACCTCAA AAGGGCCGCT
TATACCACTG CTCAACTGGA AGCTGAAGCC AAACAGGCTT ATGATAAAAT GCGCCGGAAA
AATGCTTTTT TCAACTACCG CTCTCCGGCG GTAAAACCGG TATTGAACAG TTGGGTGGTG
ACTAAAATAG GCATAGAGGG CTATTACAAC CCGCTTTCTG GCGAAGCCAA CATCAACATG
CGCCTGCCCG AAACCTCACT TCCTTTTGTA AGTTGCCATG AAATTGCCCA CCAGCTGGGT
GTAGCCCGCG AAGATGAGGC CAACCTGGTA GGGTATCTGG TTGCCATCAA CAGTGAAAAT
CCGGATTTCC GTTATTCTGC AGCCTATAAC ATGCTCAAAA GTATCCTCTT CGAGATCAGG
ATCAAATCAG CAGAAGATTA TGAAGCCCTG TATAAGACGA TTAATCCGCT AACCTTAAAA
GACATTCAGA ACGACAGGGA TTTCTGGCAG AAATATAACA GCGATATGTA CATGTATTTT
GGACTGGCTT TCGACCGTTT TCTGAAACTC AACAACCAGC CAAAAGGTAC TGATAGTTAC
CAGGATATTG TTTTATGGCT GTACAACCTG CATAAAAGAG AGCTTCATAA AATGCAGCAA
CTCTAA
 
Protein sequence
MNKAHKHTLK KFILLFALSA MVYVFGFFPR LVEPLYSEGF YSLTSVIQRF ISGIFPFALG 
DFLYLLLILY TARSLYRFYK KIIQKRLQQS DRLHVPLQVL NFTLVLYLLF KGLWGLNYSR
IPIARQLGIS NEKYNTEELV LLGKYFIARL NNLQHLKRAA YTTAQLEAEA KQAYDKMRRK
NAFFNYRSPA VKPVLNSWVV TKIGIEGYYN PLSGEANINM RLPETSLPFV SCHEIAHQLG
VAREDEANLV GYLVAINSEN PDFRYSAAYN MLKSILFEIR IKSAEDYEAL YKTINPLTLK
DIQNDRDFWQ KYNSDMYMYF GLAFDRFLKL NNQPKGTDSY QDIVLWLYNL HKRELHKMQQ
L