Gene Phep_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3187 
Symbol 
ID8254306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3794574 
End bp3796112 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content40% 
IMG OID644936840 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003093444 
Protein GI255533072 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCATG CCTGCAGCTG GTTTAAAGAT ACCCCGGAGA TAGGGCTTAA ACTTGCAGAA 
CATTTCGACA ATAAGCTCTA TAAGCAATTT GATACAGTTG AGTACAATGT CATCTTTAAC
AGACATCTTG ATTCACTGGG AAGTAATTTC TCCAATCCAA AGTTGATTAG AGCCTATTAC
AAGAGTATCC ACAGCGAACC CGGACTGGTA ACTAAATATT TTGTTAACGG TGCGTTGGAT
ACACTTAAGA ATTATATCAG CAGAAGTGAA CAGCATGGTT TTAATCCGGA AGCGTTCGGG
TATAAGAAAC TTAAGGCACT ACTGGAGCAA CTTTCGGCCA ATAAATTTAA ATCCATTTCA
GAAGTTTATC CTGTGGTGGC CGATCTTGAG CTGAACGCTG CCGAAAGCCT GATCAGATAT
AACAATATCA TTTATTATGG GGCATTAAAC CCCCGTAAAT TGTTGTCAAG GTATTATGTG
CCTGTTAAAA GACCCGACAG TGCAAGTATG ACTGCAGTAC TGGCAACCGG CAACCTGGAA
AAACTATTGC GTGACATTCA GCCAGCTTCT GAGCAGTACA AGGTGCTTCA GCACGCCATG
CTCAGTTATG CTCAAAAAGG AGAAAAGGAT ACACAGGCCT TTAAAACAGT AATGGTAAAT
ATGGAAAGAT TGAGGTGGAA ATTGCCCGAT CTTGGCGAAG AACATGTTGA AGTGAACATT
CCTGATTTTA CCTTAACCTG GTTTAGCGGA CAGGATACAC TGAGCCATAT GAAGGTTTGT
GTTGGTGGAG CCCGTGAAAA AGATTACGCA GAAAAAATAA AGTTGTACCT GAAATCAGGA
AATCTTGATG ATAAGCCTAA AAATCATGAA ACACCAATTT TATACAGTAA ACTTAATTCC
ATTCAGGTAA ACCCGATATG GAATATCCCT GTGAGCATTG CCAGAAGTGA AATTTACTGG
CAGGCCATCA GAGATCCTTA TTATTTATCC AATAACAACA TTAAGGTTTA TTATAAGGGA
CAACTGGTTA CCGATCCGGA TACGATACAG TGGAACAAAT ATCCAAGGGA AAAATTACCT
TTCCAGTTTA AGCAAGGTTC TGGCGAAGGC AATGCCCTGG GTAAGTTTAA ATTCATATTT
GATAATGGAT CTAGTATTTA CCTGCACGAT ACCAATAATA AAAGTGCCTT TGCGCGTAAC
AACAGGGCCA TTAGCCATGG CTGTGTGAGG GTAGAAAAAC CATTGGAATT TGCCGAAATG
CTGGTTAAGG ATAAGTATCA GTACGATCAG TTGAGGATGG AAGTGAACCT GCCACCTGTT
GATACAACAA AAATGGAATT ATATCGGAAA AAACTGGCTA AAAAAGCAGA TACTCTAAAT
ATTTTTCAGT TAAAGCCCAA ATGGTTTGGC ACGAAAAAAC CTGTACCGTT GATCATCAAT
TACATTACGG CCTGGTCGCA AAACGGGACC ATACAATTCA GGCCTGATGT TTATGGTCTG
GATGAAACTT TGTATGCAGC TATGAAGAAA TTCATGTAA
 
Protein sequence
MLHACSWFKD TPEIGLKLAE HFDNKLYKQF DTVEYNVIFN RHLDSLGSNF SNPKLIRAYY 
KSIHSEPGLV TKYFVNGALD TLKNYISRSE QHGFNPEAFG YKKLKALLEQ LSANKFKSIS
EVYPVVADLE LNAAESLIRY NNIIYYGALN PRKLLSRYYV PVKRPDSASM TAVLATGNLE
KLLRDIQPAS EQYKVLQHAM LSYAQKGEKD TQAFKTVMVN MERLRWKLPD LGEEHVEVNI
PDFTLTWFSG QDTLSHMKVC VGGAREKDYA EKIKLYLKSG NLDDKPKNHE TPILYSKLNS
IQVNPIWNIP VSIARSEIYW QAIRDPYYLS NNNIKVYYKG QLVTDPDTIQ WNKYPREKLP
FQFKQGSGEG NALGKFKFIF DNGSSIYLHD TNNKSAFARN NRAISHGCVR VEKPLEFAEM
LVKDKYQYDQ LRMEVNLPPV DTTKMELYRK KLAKKADTLN IFQLKPKWFG TKKPVPLIIN
YITAWSQNGT IQFRPDVYGL DETLYAAMKK FM