| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3178 |
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| Symbol | |
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| ID | 8254297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3783386 |
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| End bp | 3784918 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936831 |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003093435 |
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| Protein GI | 255533063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.856999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAA AAGCTGCATT GAGCAAGCCA TTTGCTGCCT TTGTAATTAA AGGCATCAAC
AGATGGAAAA AAAACGCTAT AAAAGCACAA GAGGATACCC TTCTTAAAAT TGTTGGTGCT
GCAAAAAACA CTGCTTTTGG CAAAGACCAT AAATTTGCTG GGATAAAGGA TTATGCAGAT
TTTAAAAAGC AGGTTCCCAT AAGGGATTAT GAAGAACTGA GGCCTTATAT AGACAGGGTA
GTTGCCGGAG AAAAGGATGT GATGTGGAAG GGCAAACCAC AGTATTTTGC CAAAACATCC
GGAACAACAT CGGGTATAAA ATACATCCCC ATTTCAAAAG AATCTATGCC GGAACACATT
AAAGCAGCGC GAAATGCGTT GTTGACCTAT GTGCATGAAA CCGGAAATGT GCGGTTTATT
GATGGCAAGA TGATCTTTTT ACAGGGTAGC CCTGTAATGA CCAAAAAGAA TGGTATAAAT
GTAGGCCGCT TGTCGGGTAT TGTGGCCAAT CTTGTTCCTG CTTATTTGCA GAAAAACCGC
CTTCCTTCTT ATCAGACCAA TTGCATCGAG GACTGGGAGG AAAAGGTGGA TGCCATAGTG
GGGGAAACGA TCCATCAGGA TATGACCCTG ATCTCCGGAA TTCCGCCATG GGTACAGATG
TATTTTGACC GGCTGGCTGC GCGCTCCGGT GGTAAAAAGA TCAAAGACAT TTTTCCGAAT
TTTGAACTGT TTGTTTATGG TGGGGTAAAT TTTGAGCCTT ATCGTGCCAA AATTGAAGCA
AGCATCGGAC GTAAAATTGA TGCTATTGAA ACTTATCCGG CATCGGAAGG TTTTATTGCT
TATCAGGACA AGCAGGACGA TAAAGGCCTG CTGCTGCTGG CAGATGCAGG CATGTTCTAC
GAATTTATCC CTGCAGATGA GTTTTATAAT GACCATCCCA GCCGTTTAAG CCTTGCCGGG
GTAGAAATAG GTGTAAATTA TGTACTGATC TTGAATACAA ATGCCGGTCT TTGGGGCTAT
GTGATTGGCG ATACTGTGAA ATTTGTATCA AAAGATCCTT ATAAAATTGT GGTAACAGGC
AGGATCAAAC ATTTTATCTC GGCTTTTGGT GAGCATGTGA TTGGTGAGGA AGTAGAGCAT
GCCTTACTTT CAGTTGCCAA TGAAGAGGGA GTAGGCATTA CCGAATTTAC AGTTGCCCCC
CAGGTAAATA CCCCTAAAGG AGAACTTCCT TATCATGAGT GGTTTGTAGA GTTTGCCAGC
TTCCCTGAAG ACATGGCCGC CTTTAGTAAA AAGGTAGACG AAGCCCTTCA GAAAAAGAAT
ATTTATTATT TTGACCTGAT TGAAGGGAAA ATATTGCAAC CTTTGATCAT CCGGTCTTTG
CAAAAAGATG CTTTTGTGCG CTATATGAAG GTGCAGGGAA AGCTAGGTGG ACAAAATAAA
GTTCCGCGTC TGGCCAATGA CAGGAAGATT GCGGATGACT TAAGTAGTTT TATAACTCGT
CCTGAAGACG AAGAACAGAG GAGAATTAAT TGA
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| Protein sequence | MGLKAALSKP FAAFVIKGIN RWKKNAIKAQ EDTLLKIVGA AKNTAFGKDH KFAGIKDYAD
FKKQVPIRDY EELRPYIDRV VAGEKDVMWK GKPQYFAKTS GTTSGIKYIP ISKESMPEHI
KAARNALLTY VHETGNVRFI DGKMIFLQGS PVMTKKNGIN VGRLSGIVAN LVPAYLQKNR
LPSYQTNCIE DWEEKVDAIV GETIHQDMTL ISGIPPWVQM YFDRLAARSG GKKIKDIFPN
FELFVYGGVN FEPYRAKIEA SIGRKIDAIE TYPASEGFIA YQDKQDDKGL LLLADAGMFY
EFIPADEFYN DHPSRLSLAG VEIGVNYVLI LNTNAGLWGY VIGDTVKFVS KDPYKIVVTG
RIKHFISAFG EHVIGEEVEH ALLSVANEEG VGITEFTVAP QVNTPKGELP YHEWFVEFAS
FPEDMAAFSK KVDEALQKKN IYYFDLIEGK ILQPLIIRSL QKDAFVRYMK VQGKLGGQNK
VPRLANDRKI ADDLSSFITR PEDEEQRRIN
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