Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3132 |
Symbol | |
ID | 8254250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3740109 |
End bp | 3740915 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936785 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003093390 |
Protein GI | 255533018 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATT CCTATATCAA ATTTGCTTTG GGCAATACGA TTACTACTGA ACAAAAATAT TTTTTCAATA AAAACGGTTT TATTCATTTC AAAAACTTTA TCGAACCGGA AACTGTAAAC GACATCATCA ACGCCTCTTT AAAAGTACAA AAACAATGGC TTGAAGAACA GCGTGAGAAA GTAAATGGCA TACCTATAAA ATACGGTAAA GACCTGGACG GCTCGCCAAT TGTACAGCGC TTTGCTTTTG TTAACCAACA CCACCAGTTG TTTGCAGAAC TGGCAAAAGA CCCCCGTTTT GAGGTATTGC TGGACCTTAT TGGTCCCGGC GCCAGGTTAG GTACCGAAGA AAAGGACGGA ATGGTATTGA ACCACTATGT AAACGGGCAT GAAAGTAAAT TTACACAGAT GGGTTGGCAT ACAGATGGCC TGCGTGATAT TTTTCATGGC CAGAAATTAA ACCCGATGCT CAATGTTGGC ATACACCTGA GCACACTAAC ACCAGAGCAG GGAGGTTTAA GGGTATTGCC TGGCACACAT ACACAGAGTT TATACCAGAT GCTCTTCCGC AAAAAGTATT TTTTAGACAA TAAGGCCGAT GCAAATGAAA TGGCAATTAC ACCCCAGGCG GGCGACCTGA CCATACATGA TGGCCGGCTC TGGCACCGTG TAGCACAATC GTCGGTTATT GGGGAAGAGA GCCGCAGAAG GGTGATCTAT TTGCCAATTA TTGCAGGTAA ATATGAACCC AAGCACGAAA ACAGCCCTAC TGCCTTTTAT CAGCGTTTTG CCGGATTAGT TAAATAA
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Protein sequence | MGNSYIKFAL GNTITTEQKY FFNKNGFIHF KNFIEPETVN DIINASLKVQ KQWLEEQREK VNGIPIKYGK DLDGSPIVQR FAFVNQHHQL FAELAKDPRF EVLLDLIGPG ARLGTEEKDG MVLNHYVNGH ESKFTQMGWH TDGLRDIFHG QKLNPMLNVG IHLSTLTPEQ GGLRVLPGTH TQSLYQMLFR KKYFLDNKAD ANEMAITPQA GDLTIHDGRL WHRVAQSSVI GEESRRRVIY LPIIAGKYEP KHENSPTAFY QRFAGLVK
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