Gene Phep_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3088 
Symbol 
ID8254206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3688025 
End bp3688930 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content43% 
IMG OID644936742 
Productsulfate adenylyltransferase subunit 2 
Protein accessionYP_003093347 
Protein GI255532975 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR02039] sulfate adenylyltransferase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00924135 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0116267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT ATAATTTAGA TTATTTAGAT GAATTAGAGG CCGAGGCCAT TCACATCTTA 
CGTGAAGTGG CAGGGCAATT TGAGAAGCCT GCCTTGTTGT TTTCTGGTGG TAAGGATTCT
ATTACGTTGG TTAGACTGGC AGAAAAAGCC TTCAGACCTG GTAAATTTCC TTTTCCACTG
GTACATATTG ATACCGGCCA TAATTTTGAG GAAACGATAA TTTACCGTGA CAATATGGTG
GCCCGCTTAG GTGAAAAACT GATTGTAGGT AGTGTTCAGG AATCGATTGA CCAGGGTAAG
GTAGTGGAAC AGACTGGCAA AAATGCAAGC AGGAATGCTT TGCAAACAGT TACTTTGCTG
GATACTATTG CTTTGCATGG TTTTGATGCC TGTATTGGCG GGGCAAGAAG GGATGAGGAA
AAGGCAAGGG CCAAGGAACG TATTTTCTCT GTAAGGGATG AATTTGGACA GTGGGACCCT
AAGCGCCAGC GCCCGGAATT GTGGAATATC TATAACGGTA AGATCCATAA AGGGGAAAAT
GTAAGGGTAT TCCCGATCAG TAACTGGACG GAACTGGATG TATGGAACTA TATCAAAAGG
GAAAATATTG GTCTGCCTTC TATCTATTTT GCACATTACA GGGATGTGAT TACCCGTAAC
GGACAGCTGA TGGCTGCTTC GCCATTTTTA AATATGGATG AAGAGGATAT TGTGGAACAT
AAAAAAGTAA GGTTCCGTAC TGTAGGTGAT ATGAGTTGTA CTGCTGCAGT GGAATCGGAT
GCAGATGAGA TAGACAACAT CATCATGGAG ATCAGTGCAT CAAAAATTAG TGAACGCGGA
GCCCGCATGG ACGATAAAGT TTCGGAAGCT GCTATGGAAG ACCGCAAAAA GGGAGGATAC
TTTTAA
 
Protein sequence
MSKYNLDYLD ELEAEAIHIL REVAGQFEKP ALLFSGGKDS ITLVRLAEKA FRPGKFPFPL 
VHIDTGHNFE ETIIYRDNMV ARLGEKLIVG SVQESIDQGK VVEQTGKNAS RNALQTVTLL
DTIALHGFDA CIGGARRDEE KARAKERIFS VRDEFGQWDP KRQRPELWNI YNGKIHKGEN
VRVFPISNWT ELDVWNYIKR ENIGLPSIYF AHYRDVITRN GQLMAASPFL NMDEEDIVEH
KKVRFRTVGD MSCTAAVESD ADEIDNIIME ISASKISERG ARMDDKVSEA AMEDRKKGGY
F