| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3080 |
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| Symbol | |
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| ID | 8254197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3678912 |
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| End bp | 3680153 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936733 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
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| Protein accession | YP_003093339 |
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| Protein GI | 255532967 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.01313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAC AAAACAAAGA ATCCCGTTGC TCTTTTTGCG GCTCAGGTAA GCAGGATACA
CTAATGCTTA TTGAAGGACT GGATGCATTT ATCTGCGATA AGTGTGTAAC CCAGGCCAAT
CAGCTGCTGG TACAGGAGCT GGGGAGTAAA AAATCGAAAG CTTTAGATAC TTCGATCACG
CTGTTAAAGC CCCTGGAAAT TAAAGCTCAT ATTGACCAGT ATGTAATTGG TCAGGATGAT
GCTAAAAAGG TGCTTGCAGT GGCGGTATAT AACCACTATA AAAGGTTAAG TCAGAAAGTA
GACAAGGGTG ATGAGGTTGA GATTGAAAAA TCCAATATCA TGTTGGTAGG TGAAACGGGT
ACAGGTAAAA CCTTACTGGC TAAAACTATT GCCAAGATAT TACATGTACC TTTCTGTATA
TGTGATGCAA CGGTACTTAC AGAGGCTGGG TATGTTGGTG AAGATGTGGA GAGCATTCTT
ACCCGATTAT TACAGGCTGC TGATTATGAC GTGGCTTCGG CAGAACGTGG CATTGTATAT
ATTGATGAGG TAGATAAGGT GGCACGTAAA AGTGATAATC CTTCTATTAC CCGGGATGTA
TCTGGTGAAG GCGTACAGCA GGCTTTACTG AAGATATTAG AAGGTACGGT AGTAAACGTT
CCACCACAGG GCGGACGTAA ACATCCTGAT CAGAAGATGA TCCCGGTAAA TACAAATAAC
ATTCTGTTTA TATGCGGCGG GGCTTTTGAT GGCATAGAAC GTAAAATTGC CAACAGGCTG
CGTACACAGG CAGTAGGTTA TAAGGTTAAA AAGGACGACG CTGAACTGGA TCTTAAAAAC
CTTTATAAAT ATATTACGCC TCAGGATTTA AAATCGTTTG GTTTAATTCC GGAACTGATT
GGACGTGTGC CGGTTTTGAC CCACCTGAAC CCATTGGATA AGCAGGCATT ACGCAACATC
CTGACCGAGC CTAAAAACTC GCTGTTCCGT CAGTATGTAA AATTGTTTGA ACTGGAAAAT
GTGAAACTTA CATTTGATAA CGAAGTTTTG GACTTTATAG TAGATAAAGC GATGGAATAT
AAGCTTGGTG CAAGGGGCCT GCGCTCTATT TGTGAGGCCA TTATGCTGGA TGCGATGTTC
GAGATCCCTT CTGATACCAG TGTCAAGGAG TTGAGCATTA CACTCGATTA TGCGGTTGAA
AAGTTTGAGA AGGCCGACTT TAAAAAGTTA AAAGCTGCTT AG
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| Protein sequence | MAKQNKESRC SFCGSGKQDT LMLIEGLDAF ICDKCVTQAN QLLVQELGSK KSKALDTSIT
LLKPLEIKAH IDQYVIGQDD AKKVLAVAVY NHYKRLSQKV DKGDEVEIEK SNIMLVGETG
TGKTLLAKTI AKILHVPFCI CDATVLTEAG YVGEDVESIL TRLLQAADYD VASAERGIVY
IDEVDKVARK SDNPSITRDV SGEGVQQALL KILEGTVVNV PPQGGRKHPD QKMIPVNTNN
ILFICGGAFD GIERKIANRL RTQAVGYKVK KDDAELDLKN LYKYITPQDL KSFGLIPELI
GRVPVLTHLN PLDKQALRNI LTEPKNSLFR QYVKLFELEN VKLTFDNEVL DFIVDKAMEY
KLGARGLRSI CEAIMLDAMF EIPSDTSVKE LSITLDYAVE KFEKADFKKL KAA
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