| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3024 |
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| Symbol | |
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| ID | 8254136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3616165 |
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| End bp | 3617346 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936673 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003093284 |
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| Protein GI | 255532912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.418532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0482136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATT TTGTAAATGA AAAAGGTTAT TACGGAGATT TTGGTGGAGC TTACATTCCC
GAAATGCTGT ACCCTAACGT AGAGGAACTG AGACAGAATT ACCTTAAAAT AATTGAGGAC
GAATCATTCC AGAAAGAGTT TCATCAGCTG CTGAAAGATT ATGTGGGCAG GCCATCCCCA
TTGTACCTGG CCAAAAGGCT CTCAAAAAAG TACAATGCGA ATATATTTCT AAAACGTGAA
GACCTGAACC ATACTGGTGC CCATAAGATC AACAATACCA TCGGGCAGAT CCTGCTGGCA
GAACGCCTTG GGAAAAAACG GATCATTGCC GAAACTGGTG CAGGGCAACA TGGGGTGGCT
ACAGCCACAG TTTGCGCATT ACGTGGCCTG GAGTGCGTGG TATATATGGG GGAAGTTGAC
ATTAAGCGCC AGGCCCCTAA TGTGGCCCGG ATGAAAATGC TGGGTGCTAA AGTAGTGCCG
GCAACCTCAG GTAGTAAAAC TTTAAAAGAT GCAACCAACG AGGCGATGCG TGATTGGATC
AATAATCCCG TGGATACCCA TTATATTATA GGATCTGTAG TCGGTCCCCA TCCTTATCCG
GATATGGTGG CTATTTTTCA ATCCATCATA TCCGAAGAAA CTAAGAAACA ACTTATAGAA
CAAACCGGAA ATGACCAGCC GGATTATGTG CTGGCCTGTG TAGGTGGTGG TAGTAATGCG
ATGGGCATGT TTTATCATTT TATAGAGGAT GAAAAAGTTA AACTGATCGC TGTTGAAGCA
GGGGGTAAGG GGATTGATAG TGGATTTTCA GCGGCTACTA CAGCTTTGGG TAAAGAAGGT
GTACTGCATG GAAGCAGAAG CATTTTGATG CAAACACCGG ACGGACAGGT GGTAGAACCA
CATTCTGTAT CTGCAGGTCT GGATTACCCT GGCATTGGCC CTCAGCATGC GCATTTATTT
AAAACGGGGC GTGGCCTGTA TGTGTCCATT ACCGATGATG AATCTTTACA GGCAGGTTTG
TTGCTTACCC AGATGGAAGG TATTATTCCG GCAATTGAAA GTGCGCATGC ACTGGCTTAT
TTAGAGAAAA TGACCTTTAC CGGTAAAGAA AATGTAGTTG TTTGTCTTTC AGGAAGAGGA
GATAAAGACA TGGATACCTA TATGAAATAC TTTAATTTAT AA
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| Protein sequence | MSYFVNEKGY YGDFGGAYIP EMLYPNVEEL RQNYLKIIED ESFQKEFHQL LKDYVGRPSP
LYLAKRLSKK YNANIFLKRE DLNHTGAHKI NNTIGQILLA ERLGKKRIIA ETGAGQHGVA
TATVCALRGL ECVVYMGEVD IKRQAPNVAR MKMLGAKVVP ATSGSKTLKD ATNEAMRDWI
NNPVDTHYII GSVVGPHPYP DMVAIFQSII SEETKKQLIE QTGNDQPDYV LACVGGGSNA
MGMFYHFIED EKVKLIAVEA GGKGIDSGFS AATTALGKEG VLHGSRSILM QTPDGQVVEP
HSVSAGLDYP GIGPQHAHLF KTGRGLYVSI TDDESLQAGL LLTQMEGIIP AIESAHALAY
LEKMTFTGKE NVVVCLSGRG DKDMDTYMKY FNL
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