Gene Phep_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2972 
Symbol 
ID8254084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3544992 
End bp3545696 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content42% 
IMG OID644936621 
Productmethyltransferase small 
Protein accessionYP_003093232 
Protein GI255532860 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.982208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATG CTTTTAGATT TAAACAATTT GAAATTGACC AGACGGGTTG TGCCATGCGG 
ATCAATACAG ATGGGGTTTT ACTTGGGGCG GTTGCCGGAA AAAATGAAGC GGCAAATATA
CTGGATATAG GAACAGGTAC AGGGGTTATC GCCCTGATGC TGGCCCAACG CTTTCCAAAC
GCTTTGGTAG ATGCGGTGGA AATTGATGAG CAGGCTGCGC TTACTGCTAC AAAAAATGCT
TTAAATGCTC CCTTTTCCGG AAGGCTAAAG GTATTGCATT CGGCTATTGA AGATTATTTG
CCAGAAAAAT ATTACGATTT AATTGTTTCC AATCCACCAT ATTTTGTGAA CGATCTTAAA
AATCCTGAAC ACAGAAAAGG GGTAGCCAGG CATACCGATG CCCATTTTTT TGAGCAGTTG
CTGGAGCGTG TGGCTGCTAT GCTGAGCAGG GACGGCAGGT TTTGGTTTAT ATTGCCACTA
AAACAGGCTC AAAATATCGT AGACATGGCC AAGTTTTACG GGTTGGGTAT GGCCGTTGTG
CTGCACATAC ATTCTGATGA AAATAAACCT GAGATCAGAC AGATTGTCTG TCTTGATTAT
TCCGGACAGC CTGCACATCA TCATAATTTA TACATTTATG CCGGGAAGGG GCTTTATACC
GACGCATATA AAGTATTGTT AAAAGATTTT TTTCTGGCAT TTTAA
 
Protein sequence
MKNAFRFKQF EIDQTGCAMR INTDGVLLGA VAGKNEAANI LDIGTGTGVI ALMLAQRFPN 
ALVDAVEIDE QAALTATKNA LNAPFSGRLK VLHSAIEDYL PEKYYDLIVS NPPYFVNDLK
NPEHRKGVAR HTDAHFFEQL LERVAAMLSR DGRFWFILPL KQAQNIVDMA KFYGLGMAVV
LHIHSDENKP EIRQIVCLDY SGQPAHHHNL YIYAGKGLYT DAYKVLLKDF FLAF