Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2972 |
Symbol | |
ID | 8254084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3544992 |
End bp | 3545696 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936621 |
Product | methyltransferase small |
Protein accession | YP_003093232 |
Protein GI | 255532860 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.982208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATG CTTTTAGATT TAAACAATTT GAAATTGACC AGACGGGTTG TGCCATGCGG ATCAATACAG ATGGGGTTTT ACTTGGGGCG GTTGCCGGAA AAAATGAAGC GGCAAATATA CTGGATATAG GAACAGGTAC AGGGGTTATC GCCCTGATGC TGGCCCAACG CTTTCCAAAC GCTTTGGTAG ATGCGGTGGA AATTGATGAG CAGGCTGCGC TTACTGCTAC AAAAAATGCT TTAAATGCTC CCTTTTCCGG AAGGCTAAAG GTATTGCATT CGGCTATTGA AGATTATTTG CCAGAAAAAT ATTACGATTT AATTGTTTCC AATCCACCAT ATTTTGTGAA CGATCTTAAA AATCCTGAAC ACAGAAAAGG GGTAGCCAGG CATACCGATG CCCATTTTTT TGAGCAGTTG CTGGAGCGTG TGGCTGCTAT GCTGAGCAGG GACGGCAGGT TTTGGTTTAT ATTGCCACTA AAACAGGCTC AAAATATCGT AGACATGGCC AAGTTTTACG GGTTGGGTAT GGCCGTTGTG CTGCACATAC ATTCTGATGA AAATAAACCT GAGATCAGAC AGATTGTCTG TCTTGATTAT TCCGGACAGC CTGCACATCA TCATAATTTA TACATTTATG CCGGGAAGGG GCTTTATACC GACGCATATA AAGTATTGTT AAAAGATTTT TTTCTGGCAT TTTAA
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Protein sequence | MKNAFRFKQF EIDQTGCAMR INTDGVLLGA VAGKNEAANI LDIGTGTGVI ALMLAQRFPN ALVDAVEIDE QAALTATKNA LNAPFSGRLK VLHSAIEDYL PEKYYDLIVS NPPYFVNDLK NPEHRKGVAR HTDAHFFEQL LERVAAMLSR DGRFWFILPL KQAQNIVDMA KFYGLGMAVV LHIHSDENKP EIRQIVCLDY SGQPAHHHNL YIYAGKGLYT DAYKVLLKDF FLAF
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