Gene Phep_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2924 
Symbol 
ID8254035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3486528 
End bp3487346 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content42% 
IMG OID644936572 
Producthypothetical protein 
Protein accessionYP_003093184 
Protein GI255532812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.512555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000388808 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACATA TGCCAATGAA AAAACTATAT ATATTGCTGG TGGCGGCCAG TTTTGCGGCA 
TGCCAGAGCG AACAAAAAGC TGGCAGCAAT ACAGATTCGA CCATCATTGC CGCTGCAGAA
CAGCTCTCTT TTAAGTACGA CTCCGTAAAA GTTTACAGTC AGCACCCCAT CAGCAGCGAA
AATGTAAAGG ACACTACAAA AGCAGTGCTC TCTTACCCTG TATTTGCCGA TCAGAAAATA
AACCAGTTTA TTGAACAAAA AGTAATGAAC TCCGCCAATG AAGGTGAACA TTACAGTTCT
TATCAGGATT TTAGTGAAGC CTTTGTGAAG AACTTTGATG ATTTCAGTAA GGAAAACAAG
GATTATGCAC AAACCTGGTT TATGAATGGC AAGGTAGAAG TTGCTGCCCG GCAGCCCCGT
TACCTGTCCT TTTTATACAC CTTTATCAAT TACGAAGGCG GGGCACATCC CAACACTGTT
TTTACCTACC TGAACTATGA TCCGGTAAGT CACCAGGAAA TTGTGCTCGA CACGCTGATC
AAGCCCGGAA GTATGCCCGC TTTAACGGCA GTAGCAGAAA AGATCTTCAG AAAAAATGAA
AAGATTCCGC CCTCAGCAAG CCTGAAAGAC AATTATTTTT TTGAAAACGA TAAGTTCAGT
CTGAACCAGA ATTTCACCAT CACCAAAGAA GGATTAAAGT TTCTTTACAA TCCGTACGAG
ATCAAAGCCT ATGCTTATGG CACAACTGAA CTGCTGATCC CCTTTGCCGA ACTGAAAGAA
ATTGCAAGAC CCAACAGCTT ATTAAACCCT AGAGATTAA
 
Protein sequence
MKHMPMKKLY ILLVAASFAA CQSEQKAGSN TDSTIIAAAE QLSFKYDSVK VYSQHPISSE 
NVKDTTKAVL SYPVFADQKI NQFIEQKVMN SANEGEHYSS YQDFSEAFVK NFDDFSKENK
DYAQTWFMNG KVEVAARQPR YLSFLYTFIN YEGGAHPNTV FTYLNYDPVS HQEIVLDTLI
KPGSMPALTA VAEKIFRKNE KIPPSASLKD NYFFENDKFS LNQNFTITKE GLKFLYNPYE
IKAYAYGTTE LLIPFAELKE IARPNSLLNP RD