| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2917 |
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| Symbol | |
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| ID | 8254028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3479803 |
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| End bp | 3480462 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644936565 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_003093177 |
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| Protein GI | 255532805 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000753738 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGATA AGAACGGAAT TGCGCAGCGT ATCGCAAAAG AAATACGCGA CGGATATTAT
GTGAACTTAG GCATTGGTAT TCCAACACTG GTGGCCAATT ATATTCCCGA GGGAATAAAT
GTCGTCCTGC AGTCGGAAAA CGGCTTGCTG GGCATGGGGC CTTTTCCTTT TGAAGGTGAA
GAAGATGCCG ACCTGATCAA TGCCGGTAAA CAGACCATTA CTACTTTGCC GGGATCGTCC
ATATTTGATT CTGCCCTGAG TTTCGGAATG ATCAGGAGCC AGAAAATAGA TTTGACCATT
CTGGGTGCTA TGGAAGTGTC GGAGAATGGC GACATTGCCA ACTGGAAAAT CCCGGGTAAA
ATGGTGAAGG GCATGGGCGG TGCTATGGAC CTGGTGGCCT CTGCCAAAAA TATTATTGTG
GCCATGCAGC ATGTAAACAA GGCCGGCGAA AGCAAATTGC TGCCCCAGTG TACCCTGCCC
TTAACAGGGG TAAGGTGCAT TAAAAAAATA GTAACAGAAC TGGCAGTACT GGATGTATTG
CCTGAAGGTG GTTTTAAATT AATTGAAAGG GCCCCGGGTG TGAGCGTCGA TTTTATTAAG
CAATCTACCA CCGGTAAGCT GTTTGCTGCT GACCATGTGC CGGAAATGGT GCTGACTTAG
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| Protein sequence | MLDKNGIAQR IAKEIRDGYY VNLGIGIPTL VANYIPEGIN VVLQSENGLL GMGPFPFEGE
EDADLINAGK QTITTLPGSS IFDSALSFGM IRSQKIDLTI LGAMEVSENG DIANWKIPGK
MVKGMGGAMD LVASAKNIIV AMQHVNKAGE SKLLPQCTLP LTGVRCIKKI VTELAVLDVL
PEGGFKLIER APGVSVDFIK QSTTGKLFAA DHVPEMVLT
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