Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2912 |
Symbol | |
ID | 8254023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3473838 |
End bp | 3475352 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936560 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_003093172 |
Protein GI | 255532800 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000266904 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000278928 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAGAAAT TTACACAAAT GCTAATGGTA GCTATGGTAG CTACCACTGG CACAACATAC GCGCAGTACG CAGGCGATGC CATACGGTTT TCCAATGGAA ATTATGGCAG TTCGGCAAGG TTTAAAGGAA TGGGAAATGC CCAGATTGGG GTGGGTGGCG ACATGAGTTC CTTAGGTGGC AACCCTGCAG GCCTGGGTCT TTTTACACGG TCGGAGTTCA GCTTTACACC AGAATTTAAC AGTGCGGGTT CAAAATCTGA CTTTCTGGGC AACAGGACAA ACGATTCAGG CAATAAATTA AATGTAAACC AGGCCGGTGT GGTATGGTAC AACCCTACCT ATAGGATACA GGGAGAAAAC ACCAATAAAG GTGTGCTCAG CACTGTATTT GGCATAGGGT TTAACAGAAA TGCTGATTTT ACCCAGCATT ATACTTATGG TGGCGACAAT ACAGCCAATT CCATGCGGAA TTATTTTGCC GAGCTGGCCA ATGGTTCGAA AAACCAGCAG GGCGACCTTG CTGCAAAATC ATTGGAAAAT TATGCTTTTG AAGATTATCT GATCAATTTC AATACGCCGG GCAACGCCAA TAACTATACC ACAAACGGTG TAACCGGGGC CAATCAGGTT AAAAAACAGA TCTCATCCGG AGGTACTTCT GAACTGAACT TTTCAGGGGC ACTGAACATC TCTAACCAGT TGTACATTGG GGCAAGCATT GGGATGGTGA ATGCACGTTA TACCAGCGAT GCAGAATTTA CAGAAAAGGG TACCGTAAAC CCTTACGACC CTACAGACGG TTTTACAGGA AACGAGAATT ATAGTTTTAC ATATGCGCAA AACCAGGAAA CCAAAGCTTC CGGGGTTAAC GGACGTTTGG GGATGATTTT CAGGCCGGCA GGCAATTTCA GGATCGGTGC CACTTTTCAG ACCCCAACCT GGCTATATGT AGAAGACATC TATGCTGAAA ATTTGTATAC TACACTGTCG GGCGAGCGTT TCCCTAGCCG GAACGCACTC AATTACAGTT ACAACTACCG TTTAAAAACC CCTTTAAAAG GGTCTTTGGG CGCAAGTTAT GTAATTGGGG GCCAGGCCAT ACTTTCTGCT GATGTAGACT TTATTGATTA TGCCAGTACC CGTTTTTCTC AGGATGGTGG TGGTACTCCT GACCAGACCA TTATGGACAA CAATGCAGAT ATAAAAAGAC TGTATACTTC GGCAGTAAAC TACAGGGTTG GTGGCGAGTA TAAGCTCAAT AACCTAAGCT TAAGAGCAGG TTATGGCTTA AATGGCAGTC CATTAAAGGA TGATACCCAG AACATATTTG ACACCAAATA TTACAGTGCT GGTTTAGGCT ACCGCGTAAA CGAGTATTAT ATAGATCTGG CCTACCAGCG TGTAGAGTCT CAGGACAGGG TAAGTCCTTA CAGCCTTAAC AATGGTACAG AACCTGTAGC CAGTCTGAAA AATGCAAACA ACAATGTATT CCTTACTTTC GGAATCCGTT TTTAA
|
Protein sequence | MKKFTQMLMV AMVATTGTTY AQYAGDAIRF SNGNYGSSAR FKGMGNAQIG VGGDMSSLGG NPAGLGLFTR SEFSFTPEFN SAGSKSDFLG NRTNDSGNKL NVNQAGVVWY NPTYRIQGEN TNKGVLSTVF GIGFNRNADF TQHYTYGGDN TANSMRNYFA ELANGSKNQQ GDLAAKSLEN YAFEDYLINF NTPGNANNYT TNGVTGANQV KKQISSGGTS ELNFSGALNI SNQLYIGASI GMVNARYTSD AEFTEKGTVN PYDPTDGFTG NENYSFTYAQ NQETKASGVN GRLGMIFRPA GNFRIGATFQ TPTWLYVEDI YAENLYTTLS GERFPSRNAL NYSYNYRLKT PLKGSLGASY VIGGQAILSA DVDFIDYAST RFSQDGGGTP DQTIMDNNAD IKRLYTSAVN YRVGGEYKLN NLSLRAGYGL NGSPLKDDTQ NIFDTKYYSA GLGYRVNEYY IDLAYQRVES QDRVSPYSLN NGTEPVASLK NANNNVFLTF GIRF
|
| |