Gene Phep_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2894 
Symbol 
ID8254004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3454212 
End bp3455381 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content42% 
IMG OID644936541 
ProductFecR protein 
Protein accessionYP_003093154 
Protein GI255532782 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.226119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCA ATATTATGGA AAAGGAAAAA CTGTTTAAAC TTCTGGAAAA GATCGAATCT 
GGCTCAGCTA CGACTGAAGA ATTGGCCCAG TACAATCAAC TTTATATGCA TTTTCAAAAA
GCTGAAGACT GGGATACCCT GACCATGGGA GAAAAACAGA AAATTGAAAA GGAGATGTAT
ACAAGCATCT CGGAAGCGAT TGAAGTACCC TCAAAACAGA AAAAATCTTA TTCACTTTTC
AACTATGCGG CTGCAGCAGT TCTGCTGATC ACTGTTTCAA TAGGTTTTTA TTTTTATAAA
CTCAATCCAG CCGTAGTCAC AAAAAAGCAG GATTCAAAAG CAGTTCATAT TCATGACAGG
CCCCCTGGTG GGAACAAAGC CACCTTAACA CTTAACAATG GTACTAAAAT ATCGCTTACC
GATGCCAGCA ATGGTGATCT GGTTAAACGA TCAGGTATAT CCATCACTAA AGCAGCTGAC
GGGCAATTGG TTTATAAAGT TTTGGGGCCC GCCAAAAATC AGGCGAATGC AGCCATGGAG
TATAACAGCA TCAGTACACC AAATGGAGGA CAATACCAGA TTTTGCTGTC CGATGGATCC
AAGGTCTGGC TAAATGACGC TTCTTCCTTA AAATTCCCAA CAGTATTTAC CGGTGAAATG
CGTAATGTAG AGCTGAGTGG TGAGGCGTAT TTTGAGGTTT CTAAAAATGA GAAAATGCCT
TTTACAGTGA ACGCAAAGGG AACAAGTGTG CTTGTTTTGG GAACGCACTT TAATATAATG
GCCTATCCGG ACGAAAAAGC GGTCAGGACG ACATTACTGG AGGGGGCTGT AAAATTGGTC
CATGCAGATG ACGAGGCTTT TCTTAAACCG GGAGAGCAGG GGACAATTAA GGAAAAAGGT
GGAGGTTTTA AAGTACGCGA GGCAGATATT GCTGCTGTAA TGGCTTGGAA AAACGGGTAT
TTCCTGTTGG ATAACGCAAG TTTGCCCCAG CTGATGCGTC AGATATCAAG ATGGTATGAT
GTAGATGTGG TATATGCTTC CGGTAATCTT AAAGACCATG AATTTGTAGG AGAAGTAAGC
CGAAAATATA GTCTGATGAA GATTTTAAAA ATTCTGGAAC TGAGTGGGCT CACCTTTAAA
CTGGAGGGCA GAACATTAAC CGTTAAATAA
 
Protein sequence
MSPNIMEKEK LFKLLEKIES GSATTEELAQ YNQLYMHFQK AEDWDTLTMG EKQKIEKEMY 
TSISEAIEVP SKQKKSYSLF NYAAAAVLLI TVSIGFYFYK LNPAVVTKKQ DSKAVHIHDR
PPGGNKATLT LNNGTKISLT DASNGDLVKR SGISITKAAD GQLVYKVLGP AKNQANAAME
YNSISTPNGG QYQILLSDGS KVWLNDASSL KFPTVFTGEM RNVELSGEAY FEVSKNEKMP
FTVNAKGTSV LVLGTHFNIM AYPDEKAVRT TLLEGAVKLV HADDEAFLKP GEQGTIKEKG
GGFKVREADI AAVMAWKNGY FLLDNASLPQ LMRQISRWYD VDVVYASGNL KDHEFVGEVS
RKYSLMKILK ILELSGLTFK LEGRTLTVK