| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2893 |
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| Symbol | |
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| ID | 8254003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3450711 |
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| End bp | 3453944 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936540 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093153 |
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| Protein GI | 255532781 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.636312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.702134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA CCGTAATTTT AATAACCATT ACCTGTCTGC ATTTATCTGC AAAGGTGTTT
TCCCAACGGA TAAACCTTAA TGAAAAGAAT GCGGCCTTTT CATCTATAGT GAAGTCTATT
GAAAAGCAAA GCGGCTACAA ATTCTTTTAC GACAATAAAC TGATCAATCC GCGGATAAAG
CTCACCGTCT TTCTGAAAAA TGTTCCCCTG GAGCAGGCAC TGGAACAATT ACTTGAAGAT
AAATCGCTGA CTTATACGAT AGTAGACCAG GTCATCGTAT TGAAACAGGC TGATTTAAGC
GTGTCAACCC CAGCCGTATT TGACCGGGTT ACCGGAAGGG TAGTTGATGA AAAGAACATG
CCTATGCCTG GTGTGAGCAT TAAAGTGAAA AACAATACCG GCAAAGCTGT TACGGATACG
GACGGGAAAT TTCAGCTGGT AGCTAAAAAA GGGGATGTGC TGGTTTTTAG TTTTATTGGC
TATACCAATA AGGAAGTAGT TTATGATGGG CAGGGCAGTA TGAGTGTTTC GCTTAGTGTA
GCAAATATTG AGATGAATGA AATTGTGGTG GTTGGCTATG GTGAAGTTAA AAAGCGAGAC
CTTACCGGAG CACTTTCTTC GCTCCAGTCA AAAGACATTG TGAGGTCTAA CCCGGTGCTG
GCTGCTAAAG CTATTCAGGG AACAGTTGCG GGCGCTACGG TAACCAAAGC GAGTAACCGG
CCGGGTGCGC CCTATAACAT TACCATCAGG GGTGAAAATA CGATCAATAA TTCTACCCAG
CCCCTGATCG TGATTGATGG ACTGATGGGC GGAGACTTAA ATACCCTTAA CCCCAATGAT
ATCCAATCTA TGGATATCCT TAAAGATGCC TCTTCCACCT CTATCTACGG TGCAAGGGGT
GCAAATGGAG TGGTTATCGT GACCACAAAG AAAGGCGTAT CTGGTGAACT GAAGTTAAGT
TATGATGCCT ATGTGGGCAT GAAAAAGATG GCTCACGGGC CTGAAATGAT GACCACACCG
CAATTTTATA AGCTTGCCTA TACAGATATG GTTGCAGCAG GACTTACGGG AACGGTTTTT
ACGATTGCCG AAACCGCAAA TATTGATGCA GGAAGAACCA CCGACTGGGC CGATCTGATT
ACCCATAATG GCATTCAGAC CAGTCATAAC CTGAGCTTGT CCGGAGGTAC GGATAAAACT
ACCTACAGGT TTTCGGGAGG TTATTTAAAT GAACAGGGTA ATGTTAAATA TACCGGTTAT
AAACGTTACA ATTTAAATGC CGGCCTGGAC AGTAAACTGG GTGAGCATGT GAAGGCCGGA
TTCACTTCTT ATGTAACCTA TAGCGATCAG AACTGGGGCT CACAGGAATC ATTAAGGGGC
GCATACAGGG CACGCCCTAC CGGGACACCT TATTATGCAG ACCTGACCAA TCCAAGCCAG
AACGCGGATA TCAATGTGGA TGGACTGGCC ATATGGATGG GTATCAATGA TAAACAGGTA
CCCAACCCGC TTGCCGATAT TGATCCCAAA ACATCTTTGC TTAAAACAAT GACGCTTACC
GCCCTGGGCA ATGCTTATGT TGAAGTGTCG CTGCTTAAAG GTTTGTCTTT CAGGAGTTCT
CTTTCGGCTT CTTACAGCAA TGCTAAAATA GGGGACTGGC GTGGTACCTG GTCGAAATCT
CAGATCGGGA GTTTGCCAAG GACCCAGCTG GATACCAAGG GGATGGCAAA TTATACTTTC
GACAATATCC TCAGTTACAA AAAGGATATT GGAAAACATT CCATAGGTTT TACGGGTCTG
TATAGTGCCT ATTATCAGCG GGATGAGACC ACCAGTATTG CTGTAAAAGA CCTGCCTTAT
ACTTCTTACT GGTATGCTTT AAATACCGGT ACGATTACTG CAAGGAGCAG TAACCTGATA
GAGCGCTCAC TCCTTTCTTT CATGGGCAGG ATCAATTATG GATACGATGA CAAATATTTA
CTGACAGTTA CCGGCCGTTC AGATGGTGCT TCTCAACTTG CAGCAGGCAA TAAATGGGCA
TTTTTCCCAT CTGTTGCCCT GGCCTGGAGA ATGAGCGAAG AACAGTTCAT TAAAGAACTC
AATATATTCT CTAACCTGAA ACTCAGGGGC AGCTATGGCG AGGTAGGTAA TGCTACGGTA
AACCCATACA GTACGCAGGC GCTCCTGTTA AATACAGGTT ACGATTTTGA TGGTGCAGCA
GCGATGGGCT TTGCACCTGC CAACCTTGGT AACAAGAGCT TGAAATGGGA AAGAAGTAAA
GAGTTAAATA TTGGTATTGA TGCGGGATTT TTCAACAACC GCATTACTGC AGCGATTGAA
ATTTACAACA GAAAAACAGT GGATCTGATC CTGAATCAAA AAATGCCAAC TGTAACCGGG
TTTACCGAGG TAATTGCCAA TGTGGGTAAA ATCCAGAATA AGGGGGTAGA GATCACTTTA
AATACCCAGA ACATCATGAA GCCTGATTTT GGATGGAACA GTACGTTTTC TTTTACCAAA
AACAACAACA AGCTGCTGGA ATTGTATGGC GGAGGCCAGA CTTTTGATAA AGGAAACAAA
CTGTTTGTGG GTTATCCCAT CCGTGCCAAT TTTGATTACC AGTTTGCCGG CATCTGGCAG
CTTGCCGATG TGGACCAGGC AAAAGTTTAC GGGCAGCTAC CTGGTTCTGT GCGTGTGGTT
GATCAGAACA AGGACAATAA GATTTCTTCT TCCGGTGATA TTGATGACCG GGTAGTACTG
GGTACGCAGT TGCCAAACTG GCTGCTGGGA GTTACCAACC GTTTCAATTA CAAGAAATTC
GATCTTTCTT TCTTCCTTTA TTACAGGAAT GGCGGACAAT ACAGCAATTC AACCCTGTCA
GGAACATTTG GTGAACTGGG TACCCGCTAC AATTCACTGG CTTCTTTAGA TTACTGGACC
AAAGACAATC CTTCCAATAC TTATTTTTCA CCTTATGTAG CCAATCCATA TAGAAGTGCG
ATCAACTACC AGGACGCAAG TTTTTTAAGG ATATCTGACA TCACAGCAGG TTATACTTTG
CCCAGGAATT TTCTGAGTAA ATATAAAATT GCCAATGCCA GGTTCTATGC CCAGGTTTCC
AATCCTTTTA TTTTTACAAA GTATACCGGC TTTGATCCTG AATTTAATTC GGCTATTTAC
CAGGACGATG TACCATCGGC AATTTATTCG TTGGGTGTAA ACATCAGTTT CTAA
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| Protein sequence | MKLTVILITI TCLHLSAKVF SQRINLNEKN AAFSSIVKSI EKQSGYKFFY DNKLINPRIK
LTVFLKNVPL EQALEQLLED KSLTYTIVDQ VIVLKQADLS VSTPAVFDRV TGRVVDEKNM
PMPGVSIKVK NNTGKAVTDT DGKFQLVAKK GDVLVFSFIG YTNKEVVYDG QGSMSVSLSV
ANIEMNEIVV VGYGEVKKRD LTGALSSLQS KDIVRSNPVL AAKAIQGTVA GATVTKASNR
PGAPYNITIR GENTINNSTQ PLIVIDGLMG GDLNTLNPND IQSMDILKDA SSTSIYGARG
ANGVVIVTTK KGVSGELKLS YDAYVGMKKM AHGPEMMTTP QFYKLAYTDM VAAGLTGTVF
TIAETANIDA GRTTDWADLI THNGIQTSHN LSLSGGTDKT TYRFSGGYLN EQGNVKYTGY
KRYNLNAGLD SKLGEHVKAG FTSYVTYSDQ NWGSQESLRG AYRARPTGTP YYADLTNPSQ
NADINVDGLA IWMGINDKQV PNPLADIDPK TSLLKTMTLT ALGNAYVEVS LLKGLSFRSS
LSASYSNAKI GDWRGTWSKS QIGSLPRTQL DTKGMANYTF DNILSYKKDI GKHSIGFTGL
YSAYYQRDET TSIAVKDLPY TSYWYALNTG TITARSSNLI ERSLLSFMGR INYGYDDKYL
LTVTGRSDGA SQLAAGNKWA FFPSVALAWR MSEEQFIKEL NIFSNLKLRG SYGEVGNATV
NPYSTQALLL NTGYDFDGAA AMGFAPANLG NKSLKWERSK ELNIGIDAGF FNNRITAAIE
IYNRKTVDLI LNQKMPTVTG FTEVIANVGK IQNKGVEITL NTQNIMKPDF GWNSTFSFTK
NNNKLLELYG GGQTFDKGNK LFVGYPIRAN FDYQFAGIWQ LADVDQAKVY GQLPGSVRVV
DQNKDNKISS SGDIDDRVVL GTQLPNWLLG VTNRFNYKKF DLSFFLYYRN GGQYSNSTLS
GTFGELGTRY NSLASLDYWT KDNPSNTYFS PYVANPYRSA INYQDASFLR ISDITAGYTL
PRNFLSKYKI ANARFYAQVS NPFIFTKYTG FDPEFNSAIY QDDVPSAIYS LGVNISF
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