| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2806 |
|---|
| Symbol | |
|---|
| ID | 8253914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3321480 |
|---|
| End bp | 3322775 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644936452 |
|---|
| Product | protein of unknown function DUF1593 |
|---|
| Protein accession | YP_003093067 |
|---|
| Protein GI | 255532695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.1118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AAGCATTGAC CTCTATTTGC CTGTTCTTTG CAGCCAGCAC TATATTAACG
GCCCAGCAAT CCGTACCTGT AAAGCCCCGC ATCCTCATCA GTACCGATAT TGGCGGCACA
GATCCGGATG ACAACCAATC TTTAACCCAT TTTCTGATGT ACAGCAATAT ATTCAATACA
GAAGGCCTGA TATCCTCTCC TTCCTATGGA AATGGCAGCA AACAGGAAAT CCTCAGAATG
ATTGATTTAT ATGAAAAGGA TTTGCCGAAG CTGAAAAAGC ACATTAAAGA TTACCCATCG
CCAGATGCCT TACGCAAAGT AACCAAACAG GGCAGGCATG GCGCAGCGCC CTATATCGGT
TATACCACAG CTACCGAAGG CTCCGACTGG ATCATTAAAT GTGCCAGCAA GAAAAGCACG
CAGCCCTTAT GGGTGCTGGT TTGGGGCGGG CTGGAAGACC TGGCCCAGGC CTTGCATGAT
GCGCCTGAAA TAAAAAGTAA AATTAAGGTG TACTGGATTG GTGGCCCCAA TAAAAAGTGG
AGCGCTTCCA GTTATGCCTA TATCGCCCAA AACTTCCCCG ATCTTTGGTT TATTGAAACC
AATGGCTCTT ACTATGGGTT CTTTTCAGAT CATGGTGTGC CTGAAAAATT AAAAGGCAAA
AATTATTACG ACAATTATAT TCAGGCCGCC GGGCACCTTG GTGCTGATTT TAAAAATTAC
TATAAAGGGG AAATTAAAAT GGGCGATACA CCTTCCCTGC TCTATATGAT GGATGGAAAC
CCTGCCGATC CGTTTAAAGA AAGCTGGGGC GGAAGCTTCG AAAAACTGAG CCACAGCCCC
AGGATTATAT TGAACCACAG CACCACACTG TCCGATACAA TAACCGTATA TGCATTGCTC
GACTTTCAGT TTAAAGGGCC GGTAATTGAT ATCCCGGCCG ATTCAGCTTG CTTCAAAATG
ACAGTCAAAG CCGGAATCGG CATTCAGGAA TGGGATGGCT TTTACCTGGG CAATGGCAAC
TACGGACTTA AATATGCCGC TAAAGAAACT GAAGTACTCA GTTATCAGAT CAGTTCAAAA
ATACCCGGCT TTCCGGAACA AAGCGGACAG TTGGTAGTGG ATAACATCTG GCCCGGCAAA
AAACGTCCTA CAGATTATCA ATTGGGGGCA AACTGGTATA CGGACAAGGT AGATCCAGGA
CTTTTCGACG GGATAAGACA GGGTGCAAAA ACAGTTCTGA AATGGAGAAA TGAGGCAATG
CTGGATTGGG CAAAGCGCTG GGAATGGCTG CGATAA
|
|---|
| Protein sequence | MNLKALTSIC LFFAASTILT AQQSVPVKPR ILISTDIGGT DPDDNQSLTH FLMYSNIFNT
EGLISSPSYG NGSKQEILRM IDLYEKDLPK LKKHIKDYPS PDALRKVTKQ GRHGAAPYIG
YTTATEGSDW IIKCASKKST QPLWVLVWGG LEDLAQALHD APEIKSKIKV YWIGGPNKKW
SASSYAYIAQ NFPDLWFIET NGSYYGFFSD HGVPEKLKGK NYYDNYIQAA GHLGADFKNY
YKGEIKMGDT PSLLYMMDGN PADPFKESWG GSFEKLSHSP RIILNHSTTL SDTITVYALL
DFQFKGPVID IPADSACFKM TVKAGIGIQE WDGFYLGNGN YGLKYAAKET EVLSYQISSK
IPGFPEQSGQ LVVDNIWPGK KRPTDYQLGA NWYTDKVDPG LFDGIRQGAK TVLKWRNEAM
LDWAKRWEWL R
|
|---|
| |