Gene Phep_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2793 
Symbol 
ID8253901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3305839 
End bp3306198 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content37% 
IMG OID644936439 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003093054 
Protein GI255532682 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGG TAGTTATCGC TGAGAAATTA AAGCTATTCT CTGAATATTG GAGTCCGAAA 
ATTGTTGGGG AACTTAATGG ACAACATGTT AAACTGGCAA AGTTTAGGGG TGAATTTGTT
TGGCATAAAC ATGATGATGA GGATGAGATG TTTTTAGTAC TGGAAGGGGT TTTGAAAATG
GAACTCCGGG ACAAAACAAT TGTAATCCAT AAAAATGAAT TTTTAATTGT TCCGAAAGGA
ACGGAACACA GGCCGGTTGC AGAAAATGAA GTTTCTGTTA TGCTTTTTGA GCCTGCAACG
ACGTTAAATA CTGGTGATAC AGAAAGCGAC CTGACAAAAC ATGTTTTAGA CAGTATATAA
 
Protein sequence
MEKVVIAEKL KLFSEYWSPK IVGELNGQHV KLAKFRGEFV WHKHDDEDEM FLVLEGVLKM 
ELRDKTIVIH KNEFLIVPKG TEHRPVAENE VSVMLFEPAT TLNTGDTESD LTKHVLDSI