Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2790 |
Symbol | |
ID | 8253898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3300880 |
End bp | 3301818 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644936436 |
Product | histidine kinase internal region |
Protein accession | YP_003093051 |
Protein GI | 255532679 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTATC TAAACTACCT GGTCGCATTT TTATGGATTT TAACCGTTAT TGTCCTGCTT TGGTTTGGCA ACAGATTTAT TTTTAGAATA TTGGATAAAA GCGTGTCCTG GCTTAAATAT ACAGCCAGGA GGTTTTTCCT TCAGCTGATG CTGAGTTGTA TTTATTCTCT GGCCTGCATT AACCTTAGTT ATTATCTATT TAAGATTACC AGTACAGTTA CCCCGCCCGA TCTGGCCCAG ATCCTGGTGC TCAACATTTA TGGGCTGTTG TTTATTATTC CGGTACTTTC AGTCAATTTT GGCATTTATT TTATGATGCA ATGGAAAAAA GAACATATAA AGTCCGACCA GTTGAAACAG GAAAATTTAA ACAGCCAGCT GGAAGCATTA CGCATGCACA TTGACCCTCA TTTTCTGTTC AATAACCTGA ATGTACTGTC AACCCTCATT GAAGAAAACT CCAGGGATGC CCAGTTTTTT CTGGAACGCT TTGCCGATGT ATACCGATAT GTACTGCAAT ATAAAAAAGA AGAGTTGGTT GCCCTAAATA CGGAAATCAC TTTTATCAGA TCGTATGTTT TTTTATTGAA AAAACGTTTC GAAGAACAAT GTATAATTGA TATTGACATT CCCGGAGATC TACCGGACAC GATGTGCATA CCTCCATTGT CGTTACAAAT GCTTGTCGAG AATGCAATTA AACACAATAA AATATCCCTG AAGAGCCCGC TGATGATCGG TATTTTTATT GAGCATGGAA CAACTTTGGT TGTCCGGAAT AATTACCAGC CCAAACCGAA TTCGGAAAGT AAACTGGCCA ATACAGGTCT GGAAAATATC AGTAAAAGAT ACAAGTACTT ATCTGATAGT GCAATAACTG TAGTTAGAGA TGAAAATTCC TTTGTTGTGA AACTTCCGCT TTTAGAACTG GAAGATTGA
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Protein sequence | MMYLNYLVAF LWILTVIVLL WFGNRFIFRI LDKSVSWLKY TARRFFLQLM LSCIYSLACI NLSYYLFKIT STVTPPDLAQ ILVLNIYGLL FIIPVLSVNF GIYFMMQWKK EHIKSDQLKQ ENLNSQLEAL RMHIDPHFLF NNLNVLSTLI EENSRDAQFF LERFADVYRY VLQYKKEELV ALNTEITFIR SYVFLLKKRF EEQCIIDIDI PGDLPDTMCI PPLSLQMLVE NAIKHNKISL KSPLMIGIFI EHGTTLVVRN NYQPKPNSES KLANTGLENI SKRYKYLSDS AITVVRDENS FVVKLPLLEL ED
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