Gene Phep_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2790 
Symbol 
ID8253898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3300880 
End bp3301818 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content38% 
IMG OID644936436 
Producthistidine kinase internal region 
Protein accessionYP_003093051 
Protein GI255532679 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTATC TAAACTACCT GGTCGCATTT TTATGGATTT TAACCGTTAT TGTCCTGCTT 
TGGTTTGGCA ACAGATTTAT TTTTAGAATA TTGGATAAAA GCGTGTCCTG GCTTAAATAT
ACAGCCAGGA GGTTTTTCCT TCAGCTGATG CTGAGTTGTA TTTATTCTCT GGCCTGCATT
AACCTTAGTT ATTATCTATT TAAGATTACC AGTACAGTTA CCCCGCCCGA TCTGGCCCAG
ATCCTGGTGC TCAACATTTA TGGGCTGTTG TTTATTATTC CGGTACTTTC AGTCAATTTT
GGCATTTATT TTATGATGCA ATGGAAAAAA GAACATATAA AGTCCGACCA GTTGAAACAG
GAAAATTTAA ACAGCCAGCT GGAAGCATTA CGCATGCACA TTGACCCTCA TTTTCTGTTC
AATAACCTGA ATGTACTGTC AACCCTCATT GAAGAAAACT CCAGGGATGC CCAGTTTTTT
CTGGAACGCT TTGCCGATGT ATACCGATAT GTACTGCAAT ATAAAAAAGA AGAGTTGGTT
GCCCTAAATA CGGAAATCAC TTTTATCAGA TCGTATGTTT TTTTATTGAA AAAACGTTTC
GAAGAACAAT GTATAATTGA TATTGACATT CCCGGAGATC TACCGGACAC GATGTGCATA
CCTCCATTGT CGTTACAAAT GCTTGTCGAG AATGCAATTA AACACAATAA AATATCCCTG
AAGAGCCCGC TGATGATCGG TATTTTTATT GAGCATGGAA CAACTTTGGT TGTCCGGAAT
AATTACCAGC CCAAACCGAA TTCGGAAAGT AAACTGGCCA ATACAGGTCT GGAAAATATC
AGTAAAAGAT ACAAGTACTT ATCTGATAGT GCAATAACTG TAGTTAGAGA TGAAAATTCC
TTTGTTGTGA AACTTCCGCT TTTAGAACTG GAAGATTGA
 
Protein sequence
MMYLNYLVAF LWILTVIVLL WFGNRFIFRI LDKSVSWLKY TARRFFLQLM LSCIYSLACI 
NLSYYLFKIT STVTPPDLAQ ILVLNIYGLL FIIPVLSVNF GIYFMMQWKK EHIKSDQLKQ
ENLNSQLEAL RMHIDPHFLF NNLNVLSTLI EENSRDAQFF LERFADVYRY VLQYKKEELV
ALNTEITFIR SYVFLLKKRF EEQCIIDIDI PGDLPDTMCI PPLSLQMLVE NAIKHNKISL
KSPLMIGIFI EHGTTLVVRN NYQPKPNSES KLANTGLENI SKRYKYLSDS AITVVRDENS
FVVKLPLLEL ED