Gene Phep_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2711 
Symbol 
ID8253819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3188993 
End bp3190144 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content44% 
IMG OID644936359 
ProductFecR protein 
Protein accessionYP_003092974 
Protein GI255532602 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG ACCCGGGTAA ATTATTGGAA AAATACAAAG CAGGCAATTG TACTGAAAAA 
GAAAAAGCAA TTGTAGAAAG CTGGTATCTG GAACTGGTAT CCAAAGGGAA TGCCCCGGCC
GCTGCGGACA TCGAAATTTC TAAAAAAGAA GTTTGGGCAT CCTTAGCTGA AGGTAAAACG
GATCCAAAGA AAAATACAGT ATGGCGCTGG GCCATTGCAG CAGCAATCCT CTTTCTCATC
GGTGCGGCCG GGTTATTTAG CTTAAAAGAG GAGGGTACAA CCACCCTTAC AAAACATACG
CTAAAAAACA ACGATGTGGC CCCTGGTAGC AATAAGGCCT TTCTGACCCT GGCAGATGGA
ACTAAAATAT CTTTAACAGA TGCTGAAAAT GGAGAGATTG CCAGACAGCA GGGACTTAGC
ATTCAAAAAA CAGCCAATGG GCAACTGGTA TATACGGTAG ATGACAAAGC TGCCGGAAAA
AACAGTAAGG TCGCATTCAA TACCATCGAG ACCCCAAAGG GGGGACAGTA CCAGATCAAT
TTGCCTGATG GTACCAGGGT ATGGCTAAAT GCCGCTTCAT CCCTGCGCTA TCCTACAAAA
TTCAGCAGCA ATACCCGCAG TGTTACACTC CAGGGTGAAG GATATTTTGA AGTTGCCAAA
ATAAGCGACA GTAAGGCCAG GCGTATTCCC TTTATTGTTA AAACTGCAAA CCAGGAAGTA
GAAGTATTGG GCACGCATTT TAACATCAAT AGTTATGACG ATGAAAATGA GGTCAAAACC
ACCCTTTTGG AAGGTTCCGT GCGGGTGTCT CTGGTAGGAA ATATTAAAAA CGGCCCTTCA
AAACTGCTGA AACCGGGCGA ACAAAGTCAG CTGGGCAACC AGGCTATCCA GGTAAAAACT
GTGGATACCG AAACTGTTAT GGCCTGGAAA AACGGCGATT TTGTATTTAA AGGAGAAGAC
CTGAAAAGTA TTATGAAAAA AGTGGCCAGG TGGTACGACG TAGAGGTCGT TTATCAGGGA
GATTTCGATC ACCTGAAATT TGCAGGCTAC CTGTCCCGCT CAAAAAATAT CTCATCGGTA
CTGGGAATTA TGGAATCAAC CGGAAAGGTT CATTTTTCCG TTGAAGGAAG AAAGGTAACT
GTATTAAAAT AG
 
Protein sequence
MQKDPGKLLE KYKAGNCTEK EKAIVESWYL ELVSKGNAPA AADIEISKKE VWASLAEGKT 
DPKKNTVWRW AIAAAILFLI GAAGLFSLKE EGTTTLTKHT LKNNDVAPGS NKAFLTLADG
TKISLTDAEN GEIARQQGLS IQKTANGQLV YTVDDKAAGK NSKVAFNTIE TPKGGQYQIN
LPDGTRVWLN AASSLRYPTK FSSNTRSVTL QGEGYFEVAK ISDSKARRIP FIVKTANQEV
EVLGTHFNIN SYDDENEVKT TLLEGSVRVS LVGNIKNGPS KLLKPGEQSQ LGNQAIQVKT
VDTETVMAWK NGDFVFKGED LKSIMKKVAR WYDVEVVYQG DFDHLKFAGY LSRSKNISSV
LGIMESTGKV HFSVEGRKVT VLK