| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2688 |
|---|
| Symbol | |
|---|
| ID | 8253796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3153178 |
|---|
| End bp | 3154212 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644936336 |
|---|
| Product | Luciferase-like monooxygenase |
|---|
| Protein accession | YP_003092951 |
|---|
| Protein GI | 255532579 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0078022 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTAG GTATAGGTAT GTTTGGCGAT TTGTCAATTG ATCCGCAAAC TGGGAAACCC
AGATCTGCTC AGCTAAAACT GCAGGAAATT TTGGAGCAGA TCAAACTGGC GGATGATATA
GGTTTGGATG TCTTTGGTTT GGGCGAACAT CATCGTCCCG ATTATGCGGT TTCTTCTCCC
GAAATTGTGC TGGCCGCGGC TGCAAGCATT ACCAAAAACA TAAAACTGAC CAGTACAGTT
ACGGTATTGA GCTCAGCTGA ACCTGTAAAG GTGTATCAGG ACTTTTCAAC AATTGACCTG
ATCTCGAACG GACGTGCTGA AATTGGTGTA GGAAGGGGAA GCTTTATTGA ATCTTTTCCG
CTGTTTGGTT ATGACCTGAA AAACTATGAC CAGCTGTTTG AGGAGAAACT GGATTTGCTG
CTCAACATCA ATAACAATGA GGTAGTAAAC TGGAAAGGCG AGCTTCGTGC CCCGTTGATC
AATCAGATGG TATTGCCAAG GGCCAGCAAT AACGGACAGT TGCCTATCTG GATTGCTGTT
GGCGGGACAC CACAATCTGT ATTGCGCGCC GCGGTATTGG GCCTGCCCCT GATCGTTGCG
ATCATAGGGG GGATGCCCAA ACAGTTTCAG CCCCTGATTG AATATTATAA AGAGCAATAT
GTAAAACACG GGCATGATAT CAATAAAATG CAGGTTGGGA TACATTCGCA TGCATTTGTT
GCAGATAATG AGGCGAATGC AGATGGTTAT TACCAGAATT ATGCTGCACA GATGGACAGG
GTGGGTGCAA GCAGGGGATG GCCACCTTAT ACCAAAATGC AATATGATGG CGGACGTTCA
AAGGAAGGCG CCTTATTTAT CGGCGAAGCT GCAGCGGTAA CTGATAAAAT CCTTTATATG
CATGAAATGT TTGGGATTAC CAGATTTATC GGGCATATGG ATGTTGGTGA TCCCTCACAT
CAGGAAATGA TGAGGTCTAT TGAATTGTTT GGTGCCAAAG TAGCACCAGC GGTAAGAAAA
GCACTGACTA AATAG
|
|---|
| Protein sequence | MELGIGMFGD LSIDPQTGKP RSAQLKLQEI LEQIKLADDI GLDVFGLGEH HRPDYAVSSP
EIVLAAAASI TKNIKLTSTV TVLSSAEPVK VYQDFSTIDL ISNGRAEIGV GRGSFIESFP
LFGYDLKNYD QLFEEKLDLL LNINNNEVVN WKGELRAPLI NQMVLPRASN NGQLPIWIAV
GGTPQSVLRA AVLGLPLIVA IIGGMPKQFQ PLIEYYKEQY VKHGHDINKM QVGIHSHAFV
ADNEANADGY YQNYAAQMDR VGASRGWPPY TKMQYDGGRS KEGALFIGEA AAVTDKILYM
HEMFGITRFI GHMDVGDPSH QEMMRSIELF GAKVAPAVRK ALTK
|
|---|
| |