Gene Phep_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2688 
Symbol 
ID8253796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3153178 
End bp3154212 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID644936336 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003092951 
Protein GI255532579 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0078022 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTAG GTATAGGTAT GTTTGGCGAT TTGTCAATTG ATCCGCAAAC TGGGAAACCC 
AGATCTGCTC AGCTAAAACT GCAGGAAATT TTGGAGCAGA TCAAACTGGC GGATGATATA
GGTTTGGATG TCTTTGGTTT GGGCGAACAT CATCGTCCCG ATTATGCGGT TTCTTCTCCC
GAAATTGTGC TGGCCGCGGC TGCAAGCATT ACCAAAAACA TAAAACTGAC CAGTACAGTT
ACGGTATTGA GCTCAGCTGA ACCTGTAAAG GTGTATCAGG ACTTTTCAAC AATTGACCTG
ATCTCGAACG GACGTGCTGA AATTGGTGTA GGAAGGGGAA GCTTTATTGA ATCTTTTCCG
CTGTTTGGTT ATGACCTGAA AAACTATGAC CAGCTGTTTG AGGAGAAACT GGATTTGCTG
CTCAACATCA ATAACAATGA GGTAGTAAAC TGGAAAGGCG AGCTTCGTGC CCCGTTGATC
AATCAGATGG TATTGCCAAG GGCCAGCAAT AACGGACAGT TGCCTATCTG GATTGCTGTT
GGCGGGACAC CACAATCTGT ATTGCGCGCC GCGGTATTGG GCCTGCCCCT GATCGTTGCG
ATCATAGGGG GGATGCCCAA ACAGTTTCAG CCCCTGATTG AATATTATAA AGAGCAATAT
GTAAAACACG GGCATGATAT CAATAAAATG CAGGTTGGGA TACATTCGCA TGCATTTGTT
GCAGATAATG AGGCGAATGC AGATGGTTAT TACCAGAATT ATGCTGCACA GATGGACAGG
GTGGGTGCAA GCAGGGGATG GCCACCTTAT ACCAAAATGC AATATGATGG CGGACGTTCA
AAGGAAGGCG CCTTATTTAT CGGCGAAGCT GCAGCGGTAA CTGATAAAAT CCTTTATATG
CATGAAATGT TTGGGATTAC CAGATTTATC GGGCATATGG ATGTTGGTGA TCCCTCACAT
CAGGAAATGA TGAGGTCTAT TGAATTGTTT GGTGCCAAAG TAGCACCAGC GGTAAGAAAA
GCACTGACTA AATAG
 
Protein sequence
MELGIGMFGD LSIDPQTGKP RSAQLKLQEI LEQIKLADDI GLDVFGLGEH HRPDYAVSSP 
EIVLAAAASI TKNIKLTSTV TVLSSAEPVK VYQDFSTIDL ISNGRAEIGV GRGSFIESFP
LFGYDLKNYD QLFEEKLDLL LNINNNEVVN WKGELRAPLI NQMVLPRASN NGQLPIWIAV
GGTPQSVLRA AVLGLPLIVA IIGGMPKQFQ PLIEYYKEQY VKHGHDINKM QVGIHSHAFV
ADNEANADGY YQNYAAQMDR VGASRGWPPY TKMQYDGGRS KEGALFIGEA AAVTDKILYM
HEMFGITRFI GHMDVGDPSH QEMMRSIELF GAKVAPAVRK ALTK