Gene Phep_2672 details

Gene Information

• Locus tag: Phep_2672
• ID: 8253780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pedobacter heparinus DSM 2366
• Kingdom: Bacteria
• Replicon accession: NC_013061
• Strand: -
• Start bp: 3127998
• End bp: 3131420
• Gene Length: 3423 bp
• Protein Length: 1140 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644936320
• Product: protein of unknown function DUF1080
• Protein accession: YP_003092935
• Protein GI: 255532563

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.189319
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCAAAA AGATATTCTT TATTCTGATT GCTGCGGTAA TGCTGCAAAG TGCTGCTTTT 
GCACAGGATA AAACAGACCA GCGTACCGTT ACGACCAGGA TTGCAGATTT GCTGGCACAA 
TTACCTGCAA GGGATGCCAA GCAATTGAAA GCCAATATGC TGGAAATTGC GCAGATGGGT 
GAGGATGGTT ATGTAAGCCT GATTACCGGG CTTACTGCTC CGGGTAAGGG CAATAACGCC 
TTGCTGGAAT ATGCGATAGG CGGATTTTCA GGCTATGTTA GCCAGACGGG ACAGGAAGCC 
TGGAGAAAAA TGAGTGTAAA TGCTTATTGT AAGGCATTAA GCAAAATAAC CGATAAACAA 
AATAAATCAT TTGTGATCAG CCAGCTTGAA CTGGTTGGTA AAGATGATGC CATAGCTTGT 
CTGGAGCCTT ATTTAACAGA TGCACAGCTG GCTGATCCTG CTGCACGTGC CCTGGTAAAA 
ATCAATTCAG CTGCGGCCAA AGCGGCCTTA TTAGCGGCAT TGACTAAAAC CAGCGGCACC 
GCTAAACTTT CAGTAGTAGA GGCGCTTGGA GACATCAGGG CTAAAGATGC CGCAAAACCT 
ATTGCTGCTT TAACAACAGG TGACAATGAC CTGGCCAAAA TGTCTTTATA CGCCCTGGCT 
TATATTGCCG ATCCTGCTTC TGAAGCTGTA ATGGCTGCAG CCGCCGAAAA AAGTGGATTT 
AAGTATGAAA ATACAAATGC TGTTGCGGCT TATCTGATCT ATGCTGAGCA GCTGATGAAA 
AATGGTAATA AGGAGCTTGC CAATAATATT GCAAAAAAGA TACTTGAAAA AGCAACTGCC 
GACGAGCAGG TACATGTGCG TACAGCTGCG TTGAAGATTG TTTCCGGTTT TAGTGAAGCC 
CAAAGTAATG AATATTTACT GGGCGCAATG GATGATAAAA ACTTTGAATA CCGTGCTGCT 
GCATTAAAAT TTGCTTTACC AACCCTTACT CCTGCAACAG CTGAGCTTTG GGCCGGAAAA 
GTTACCAAAG CTGATCCTGC TACTCAGGTG GCCATTATCA ATATGCTGGG CAAGAGCAAA 
ACTCTTTCGG TACTACCTTC AATAACTAAA TTGTTTAAAA ATAAGGACCA GGGGGTAAGA 
GCAGCTGCAA TTGCAGCTGC CGGCAACATT GGCCAGGAAC AGGCACTGGA AGATTTGCTT 
AAAATAATGG GAAAAGGTGA TGCAAATGAT ATTGCTGCAG TTTCCAATGC AATTTTAAGA 
ATGAAAGGAG AGGGTATCAA TGCAAAAATT GCCGCTTTTA TCCCCAAAGC AAAACCAGAG 
GTTCAGGTAG CTCTGATCAA TGTGCTCGCT TCGAAATCGG CAAATGGACA GTTAAACACC 
ATATATAGCT TGCTGAAAAG TAAAAAGCCT GAAGTTAGGC AGGCTGCTTT TGCTGCTTTA 
AAGCAAACGG TGGCCAGCGA TAACCTGCCG CAGTTGTTTA CTTTACTGAA TGAGACAAAG 
GATCAGACGG CCCTGGTTAA TGTACAGGAG GCAATTATCT CAGCCCTGAA AGGCAGTAAA 
AATAAAGATG AACAAGCTGA TATGGTATTA CAGCAAATGG CTGCTGCTCC TGGAGATAAA 
AAAGATCTTT TTTATAAAAT ACTGGGCAGC ATAGGTGGTA ACAAATCATT AAAAGCAGTT 
TCTGAAGCGT TTAATACCGG TAATGAAGAA ACTAAAAAGG CTGCAATTGT AGCTTTGTCG 
TCATGGACAG ATACCGGTTC AATACCTGAA CTGATCAGGA TCAGTCGCCA GCCCAGCAAT 
GTTGCTTACC TTGATCAGGC AATTGAGGGC TACCTGAATT TGGTAAGGGC TGCAAAATAT 
AAACCTGAGC AGCGCTTGTT GGTGCTGCGC GAAGCCATGA TCGTAGCTAA AACACCAGTA 
CAGCAACAGC AAATATTAAA AGATGCTGAG CAGGCAAAGT GTTTCAATAC TTTATTATTT 
GCGGGTAGAT ACCTTGACAA CCAGACTTTG CAGCAGGCCG CTGCCAATAC TGTAATGAAT 
GTTGCGCTGG CTGATAAATC ATACAGGGGA ACCATTGTGA AAGACCTGCT GAATAAAGCG 
ATTGGTACAA TAAAAGGAGG TGACAGCGAG TATCAGAAGG AAGCCATGCG TAAATACCTT 
GCAGAAATGC CTGCAGGAGA AGGTTTTGTA TCGATGTTTA ACGGAACTGA CCTGAGCGGA 
TGGAAAGGTT TGGTGGAGAA TCCGATAAAA AGATCGAAAA TGGATGCCAA GAGCCTGGCC 
GATGCACAGG TAAAGGCTGA CGCCGAAGCA AAAGAAAGCT GGAAACCGAT GAATGGTGAA 
CTGCATTTTA TGAGCCATGG AAATAACCTG GCTACTGTAA AGCAATATGG TGATTTTGAA 
ATGCTGGTAG ACTGGAAAAT TATAGATGAC AAAAAAGGTA ACGGAGATGC TGGTATCTAT 
CTTCGTGGTT CGCCGCAAGT ACAGATCTGG GATACTGCCA GGGTAAAATC CGGAGCACAG 
GTAGGTTCCG GTGGATTATA CAACAATAAA GTATATGAGA GCAAACCCCT TAAGGTTGCC 
GACAATAAGC TGGATGAATG GAATACCTTC CGTATTTTAA TGAAAGGTGA TAGGGTTACC 
GTTTATTTAA ACGGAGAACT GGTAACGGAC AATGTGATTT TGGAGAATTA CTGGGACAGA 
AATCTTCCAA TCTTTGCAGA AGAACAGATA GAACTGCAGG CACATGGATC GCCTGTGGCC 
TATCGTGACA TATACATCAG GGAAATTCCC CGTGTAAAAC CTTTTGAATT GAGTGCCCAG 
GAGAAGAAAG AAGGCTATAA AGTACTGTTT GATGGTACCA ATATGCACAA CTGGACCGGA 
AATACAACAG ATTATATCAT TGAAGATGGA AACATTTCCA TTCGCCCGAG ACCAGGAAAA 
GGATCTGGAG GTAATTTATT TACCAAGGAA GAATTCAGTG ATTTTATATT CCGCTTTGAA 
TTTCAGTTAA CACCTGGTGC AAACAATGGG TTGGGGATCA GGGCACCACT GACAGGGGAT 
GCTGCTTATC AAGGTATGGA GCTGCAGATA CTTGACAATG AGGCACCGAT GTATAAAAAC 
CTGCATGTTT ATCAGTACCA CGGTTCTGTT TATGGAACTA TCCCTGCAAA AAGAGGTTTT 
CTGAAACCTG TTGGCGAGTG GAATTATGAA GAAGTTGTAG TGAATGGGCC TAAAATTAAG 
GTGATCCTGA ATGGAACTGT GATTTTGGAC GGGGACATTA CTGATGCAAG AAAAAATGGT 
GCAGCTGATG GAAAGCCACA TCCGGGTTTG TTACGTGAAA GCGGACATAT CGGTTTTCTG 
GGACATGGTT CACCGGTACA GTTTAAAAAC ATCAGGATTA AGGACCTGAG TAAAAAGAAA 
TAA 

 

Protein sequence

MIKKIFFILI AAVMLQSAAF AQDKTDQRTV TTRIADLLAQ LPARDAKQLK ANMLEIAQMG 
EDGYVSLITG LTAPGKGNNA LLEYAIGGFS GYVSQTGQEA WRKMSVNAYC KALSKITDKQ 
NKSFVISQLE LVGKDDAIAC LEPYLTDAQL ADPAARALVK INSAAAKAAL LAALTKTSGT 
AKLSVVEALG DIRAKDAAKP IAALTTGDND LAKMSLYALA YIADPASEAV MAAAAEKSGF 
KYENTNAVAA YLIYAEQLMK NGNKELANNI AKKILEKATA DEQVHVRTAA LKIVSGFSEA 
QSNEYLLGAM DDKNFEYRAA ALKFALPTLT PATAELWAGK VTKADPATQV AIINMLGKSK 
TLSVLPSITK LFKNKDQGVR AAAIAAAGNI GQEQALEDLL KIMGKGDAND IAAVSNAILR 
MKGEGINAKI AAFIPKAKPE VQVALINVLA SKSANGQLNT IYSLLKSKKP EVRQAAFAAL 
KQTVASDNLP QLFTLLNETK DQTALVNVQE AIISALKGSK NKDEQADMVL QQMAAAPGDK 
KDLFYKILGS IGGNKSLKAV SEAFNTGNEE TKKAAIVALS SWTDTGSIPE LIRISRQPSN 
VAYLDQAIEG YLNLVRAAKY KPEQRLLVLR EAMIVAKTPV QQQQILKDAE QAKCFNTLLF 
AGRYLDNQTL QQAAANTVMN VALADKSYRG TIVKDLLNKA IGTIKGGDSE YQKEAMRKYL 
AEMPAGEGFV SMFNGTDLSG WKGLVENPIK RSKMDAKSLA DAQVKADAEA KESWKPMNGE 
LHFMSHGNNL ATVKQYGDFE MLVDWKIIDD KKGNGDAGIY LRGSPQVQIW DTARVKSGAQ 
VGSGGLYNNK VYESKPLKVA DNKLDEWNTF RILMKGDRVT VYLNGELVTD NVILENYWDR 
NLPIFAEEQI ELQAHGSPVA YRDIYIREIP RVKPFELSAQ EKKEGYKVLF DGTNMHNWTG 
NTTDYIIEDG NISIRPRPGK GSGGNLFTKE EFSDFIFRFE FQLTPGANNG LGIRAPLTGD 
AAYQGMELQI LDNEAPMYKN LHVYQYHGSV YGTIPAKRGF LKPVGEWNYE EVVVNGPKIK 
VILNGTVILD GDITDARKNG AADGKPHPGL LRESGHIGFL GHGSPVQFKN IRIKDLSKKK