Gene Phep_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2646 
Symbol 
ID8253753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3089287 
End bp3090438 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content39% 
IMG OID644936293 
ProductFecR protein 
Protein accessionYP_003092909 
Protein GI255532537 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACACG GGGAAGCAGA GGCGTTATTG AAGAAATACC AGAAAGGTAA TGCTACAGAA 
GAGGAAATTA ATTGTCTTTT ACATTGGGTT CAGGGCTTTG ATACAGGCAA CCCTAAAAGT
TTTACTGTAG AAGAACTGGA AGTCATTAAA GCTGAAATGT GGTTATATCT TGCTAAAGAC
GAGGTTTCAA TTGAGAAAAT TAGGCTTTGG CCTCGCATTA TTGGTGTAGC TGCTGCGGTA
TCAGCAATTA TTTTTGGTGT TTGGTATTAT TCCCCTGATC TAATCGCTAC TCGCAAACCG
CAAGTTGTAA CACAAACTGA TATTGCTCCT GGAAGAACCG GTGCTACGCT TACATTAGCC
AGTGGCAAAA AAATAAAATT AACCGATGTT GTTAACGGCG AAATTGCTAA GGAGGCGGGA
GTTACAATTT CCAAAACTAA CTCAGGGCAA ATTGTTTACG AGATTAAAGA TTCCGGAAAC
GCATTGAATA AAATAAACGA GCTTTCCACT GCCAGAGGAG AAACTTATCA AATACGTTTG
CCCGATGGTA CAAGTGTAAT CCTTAACGCG GCTTCTTCTC TTAGATATCC TTCAAGCTTT
TCAAAGATTG AAAAACGTGA AGTTATACTT AGTGGAGAAG CATACTTTGA AGTTGCCAAA
AATAAACAGC AACCTTTTAT TGTGAAGTCA AAAAGTCAGG AAATTCAAGT GTTGGGTACA
CATTTTAACG TTACCGCCTA TCCGGAAGAC CGTAACATAA AAACAACACT GCTGGAAGGT
TCGGTGCGTA TTGTTCAGCG GCCACTTTCA GGAACAAAAG AAAATACAGG TCAGATCTAC
AGGGTTTTAA CACCTGGCGA ACAATCTGTG TCAACCGGCG ATGAAATCAG CATATCGGAC
GTAGACATTG ATATTGCTGT AGCATGGAAA AATAATAAAT TCATGTTCGA CAGTCAGCCA
ATTTCTGAGA TTATGGTCAT GTTGGCACGT TGGTACGATG TTCAGGTTGT TTATGAGGGA
AAGGTCCCTA AAGACAATTT TAGCGGTACC GTATCCAGGT ATGAAAACAT TTCAAAGGTC
CTAAGTATAT TGGAACGTGC CGGAGGTGTT CATTTTAAAA TACAGGATAG AAAAATATAT
GTTTCTGAAT AA
 
Protein sequence
MQHGEAEALL KKYQKGNATE EEINCLLHWV QGFDTGNPKS FTVEELEVIK AEMWLYLAKD 
EVSIEKIRLW PRIIGVAAAV SAIIFGVWYY SPDLIATRKP QVVTQTDIAP GRTGATLTLA
SGKKIKLTDV VNGEIAKEAG VTISKTNSGQ IVYEIKDSGN ALNKINELST ARGETYQIRL
PDGTSVILNA ASSLRYPSSF SKIEKREVIL SGEAYFEVAK NKQQPFIVKS KSQEIQVLGT
HFNVTAYPED RNIKTTLLEG SVRIVQRPLS GTKENTGQIY RVLTPGEQSV STGDEISISD
VDIDIAVAWK NNKFMFDSQP ISEIMVMLAR WYDVQVVYEG KVPKDNFSGT VSRYENISKV
LSILERAGGV HFKIQDRKIY VSE