| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2641 |
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| Symbol | |
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| ID | 8253748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3077326 |
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| End bp | 3080697 |
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| Gene Length | 3372 bp |
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| Protein Length | 1123 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936288 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092904 |
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| Protein GI | 255532532 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.42355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.497616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA AATATACAGA AAAACCGGGC AGGCCTGATC GGCTGTGCTG TAAAATTTTG
CTAATTATGC GACTAACCAC CGTACTGTTA ATGGCCTCTA TGCTTCAGGT AAACGCATCT
GGATTTGCAC AAAAGATCAA CCTCAGTAAA ACCAACGTCC CGTTGAAAAC AATCATCAGA
CACCTGAGGT TGCAATCAGG GTACGACTTT GTTTACAACA ATAAAATTCT TGCCCATACC
AAGCCCCTGA GTGTCGATTT TAAAAATATC GGGTTTATTG AAGCCTTAGA TCAGGTCTTC
GGGTCGCAGT CTTTGACTTA TACGCTTGAA GATAAAACCG TTGTTGTAAG ACTGAAACAA
TCTGCCGCTA TCGGCAAATT GTCTGATACT GATGCAAAAT CAAGTACAAA ACAAATAAAA
GTAAGAGGAA CGGTAACGGA TACTTTAGAT ATCGCGTTGT CAGGTGTAGT TATTAAAATT
AAGGGAAAAT CAAATGCCGG GACTGCAACA GATGTAAACG GAAAATATGC AATAACTGCT
GCCGGTACTG ATACGCTGAT TTTCAGTTAT GTCGGTTTTG AGCATGCTGT AGTTGCGGTG
AACGGCAAGG ATGTTGTTAA TGTGGTATTG AAGGAGCTCC CTTCTGCCCT TAAAGAACTG
GTCATAGTTG GCTTCGGCAC GCAAAAGAAG GTTACTGTGA CCGGTGCAGT TTCACAAGTT
TCGGCCAAAG ACATACAGAA ACAGCCCGTT GCAGCTATCA GCAATGCACT GGGTGGGTCT
TTGCCGGGAA TAATAACCCG GCAGTCATCG GGAGAACCAG GCGCAGACCA ATCAACCATA
GCCATCAGAG GGCTTGGGAC CTGGGTAAAT TCCAGGCCAT TGGTACTGGT TGATGGTATT
GAACGCACGC TGGATTGGGT CAACCCCACC GAGATCGAAA GCATTACCTT ATTAAAAGAC
GCATCGGCTA CAGCTGTGTA TGGATTGAGG AGTGCAAATG GCGTAATTCT AATTACAACA
AAAAGGGGAG CGGAAGGGAA ACCAAGGGTC AGCTTTTTCT CGCAAAGCTC CATGACATCT
TCACTGCGGG TGCCGGAATA TATTGGCGGT TATGAATATG CATCCCTGGC CAATGAAGCC
CTTAAAAATG ACGGAAAGAA CCCGGCATAT ACCGCAGAAG ACCTGCAGAA GTATCAGGAT
GGTTCTGATC CCTGGTTTCA TCCCAATGTA AACTGGATGG ATGAGATACT GAATAAAAAT
GCATTTCAAT ACAACAATAA TCTGAGTGTA TCCGGTGGAA ATAAAACCGC CAGGTATTAC
ATGTCTTTAG GGGCGCTTGT ACAGAACGGG GTATTTAAAG AAGATGACCT TCAGAAATTT
AATACCAATG CCACCAACAA GAGATACAAC TTCAGGGCAA ATGTGGATGT AAACGTAAGT
TCTGATATAT CCCTGTTCTT AAGCGTAGGC TCTGTGCAGC AGGCCCGTAA TTTTCCTGGT
GTTACGGCAG ATGGCATATT TAATGCGATC AAAACCGTTT CCCCGATATC CTTTCCAAAG
GTAAATCCAG ATGGATCAGT GGCAGGGAAA GACCTTTTGA TCCCTAATCC TTATGGTTAT
GTAACCCAAA GCGGGTACAA TTCTGAGACC AGGAATAATG TCCAGTCAAT TTTTGAGGTG
AAATGGAACC TGGGCAATTT ATTGTTTACA GGTTTGTCAG CACGTATCAA ATATTCTTAC
GACCACAACA ACCAGTTCAG CAAAGACAGA ATAAAGCCCT ATGCCATCAA ACAGTATACC
GGTAAGGACA GCAACGGTGA AGACCAGTAT ATCACCTACA GGAACGAAGC CCCGCTTGGC
TATGCGAACA GTTCTGCCGG TACAAGCAAC CAGTGGATGG AAGCTGCGGT GAATTACGAC
CGGGCTTTTG GCAGAAATAA CGTCAACGCC ATGCTTATCC ATACGATAAG TGAAAAAAAT
GTACTTATTA CCTCTAACTC TATAGCTGCA TTGCCATATA GGACAATGGG CTATGCAGCA
AGAATGACCT ATAATTTTGA TGAGCGTTAT CTTGCAGAGC TGAATGCAGG GTATATGGGC
TCTGAAAATT TTATGAAAGG AAAACGGTTC GGGTTCTTCC CTTCAGTTTC TGTTGGCTGG
GTACCCACAC GCGAGAAATT CTGGAATGGT TCTTCTGCAA TCAGCTTCAT GAAGATCAGG
GCCTCCTATG GCAAGGTGGG AAATGACCAG ATTGGCGACA ACAGGTTCTT GTTTTTGTCT
ACCATCAACA AGAACCAGGG CACTTTATTG CTGGGACAGT CGCAAGTTGG ATATGTAGGT
TACGGAGAAG GTAAAACAGG TTATGAAAAT GTATCCTGGG AGTCGTCCAG AAAAGCAGAT
ATCGGACTCG ATCTTGAAAT GTGGAATGGC AATTTTGTGC TGCAGGCAGA TGTTTTCCAT
GAAAGGAGAA CGGGTATCCT GATGCAAAGA CAGCAAGTTC CTGCATATAT TGGTTTTTTA
AGCGGTTCAG TACCTTTTGG TAACATTGGT ATCATTGAGA ACAAAGGTTT TGATGCACAG
GTAACCTATA AAAAAACGGT AAACTCAAAG TTCTTTTACT CAGTGAGCGG CAATATTACC
TATTCAAAAA ATAAAATTAT CGATAATGAC TCACCGGTCC CTTTATATCC CAACCTGGAA
GTAAAAGGTA AATCCATCGG AAGCAGGCTT GCATTTATAA CAGAAGGCTT TTATCAGGAC
CAGGAGGATA TCAATAACAG CCCTGCAAAT GCCTGGAACC CAAAGCCAGG TGACCTGAAA
TTTAAGGACC TCAACGGCGA CAATAAAATC GATCTCAATG ACCAGACCTA TCTGGGTTAT
CCAAGATTTC CTCAGGTCAT CTATGGGATT ACACCAGTTG TAAGGTACAA AGGATTTGAA
GTCAGCGCGC TGATCCAAGG CGCTGCCCAG ACAAATATGT TTTTGAACGG TGCATCCATC
AGACCATATG TATATGGCAG CGGAAGGGAA AATATATTGG GCGAATATTA TGCTAACCGT
TGGGTGGCCG GGGCGGATAA CAGCAATGCC AAATACCCGA GGATTGGTGA AGTCCCGGTT
CCTATCTCCC AACAACAATC CAGCAGTTAT ATGAGAGATG CCAGTTATAT ACGTATAAAG
AATGCACAAT TCGCCTACAG TTTACCAAAA AGATTTTTAC CAAAATACAT GACCCAGGTC
AGGATATCAG TTACAGCACA GAATCTGTTA ACGTTTGATA AACTGAAATT TTTAGATCCG
GAATCTGATG ATGGTACCGG ACAATACCCC ATACAGCGGG TGCTTAGTTT TGGATTGGAA
ATTGGATTAT AA
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| Protein sequence | MYKKYTEKPG RPDRLCCKIL LIMRLTTVLL MASMLQVNAS GFAQKINLSK TNVPLKTIIR
HLRLQSGYDF VYNNKILAHT KPLSVDFKNI GFIEALDQVF GSQSLTYTLE DKTVVVRLKQ
SAAIGKLSDT DAKSSTKQIK VRGTVTDTLD IALSGVVIKI KGKSNAGTAT DVNGKYAITA
AGTDTLIFSY VGFEHAVVAV NGKDVVNVVL KELPSALKEL VIVGFGTQKK VTVTGAVSQV
SAKDIQKQPV AAISNALGGS LPGIITRQSS GEPGADQSTI AIRGLGTWVN SRPLVLVDGI
ERTLDWVNPT EIESITLLKD ASATAVYGLR SANGVILITT KRGAEGKPRV SFFSQSSMTS
SLRVPEYIGG YEYASLANEA LKNDGKNPAY TAEDLQKYQD GSDPWFHPNV NWMDEILNKN
AFQYNNNLSV SGGNKTARYY MSLGALVQNG VFKEDDLQKF NTNATNKRYN FRANVDVNVS
SDISLFLSVG SVQQARNFPG VTADGIFNAI KTVSPISFPK VNPDGSVAGK DLLIPNPYGY
VTQSGYNSET RNNVQSIFEV KWNLGNLLFT GLSARIKYSY DHNNQFSKDR IKPYAIKQYT
GKDSNGEDQY ITYRNEAPLG YANSSAGTSN QWMEAAVNYD RAFGRNNVNA MLIHTISEKN
VLITSNSIAA LPYRTMGYAA RMTYNFDERY LAELNAGYMG SENFMKGKRF GFFPSVSVGW
VPTREKFWNG SSAISFMKIR ASYGKVGNDQ IGDNRFLFLS TINKNQGTLL LGQSQVGYVG
YGEGKTGYEN VSWESSRKAD IGLDLEMWNG NFVLQADVFH ERRTGILMQR QQVPAYIGFL
SGSVPFGNIG IIENKGFDAQ VTYKKTVNSK FFYSVSGNIT YSKNKIIDND SPVPLYPNLE
VKGKSIGSRL AFITEGFYQD QEDINNSPAN AWNPKPGDLK FKDLNGDNKI DLNDQTYLGY
PRFPQVIYGI TPVVRYKGFE VSALIQGAAQ TNMFLNGASI RPYVYGSGRE NILGEYYANR
WVAGADNSNA KYPRIGEVPV PISQQQSSSY MRDASYIRIK NAQFAYSLPK RFLPKYMTQV
RISVTAQNLL TFDKLKFLDP ESDDGTGQYP IQRVLSFGLE IGL
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