Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2623 |
Symbol | |
ID | 8253730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3064308 |
End bp | 3065042 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936272 |
Product | cyclase/dehydrase |
Protein accession | YP_003092888 |
Protein GI | 255532516 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.502552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA AATTGAATAA CCAAATTATG GAACATCTGT GCACCTTAAG CCTTCCTACT AATGGAAAAG AAAACATCGA CCAGGGGGAA CGGATCGTTT CCCTGTTGGG TGGAAGCTGG CTATTGTACA AGAGCCTGAA AAAAATCGGT AAACACCCCT TTCTCGGACT TCAGGGAGTA GCTGCAGGTG GACTCATGCT TTATCGCGGC GCTACAGGTA TATGCCCGGT CTACCAACAA CTTGGAAAGG ACACTACCGA TCCCCAGGCC ATCAACATTA CCGAGGATAT TGTAGTCAAT GCCCCGATAG ACAAAGTTTA TGCTTTCTGG CGGGAATTTT CCAATCTCCC TAAATTCATG GAACACCTGA AAAGCGTCGA AGAAGTAAGT GAGAAAATAT CCTTTTGGAC AGCCAATACC CCCGGAGGAT TGATTGATCT GAACTGGAAT GCCGAAATTA CCAGGGAAGA AAAGGGATCC TATCTGGGCT GGCAGTCATT GGAAGGTTCG ATGATCGACA ATGCAGGGAA GATAGAATTC CGGGAAACCT TAAACGGGAC AAGAACTGAA CTGCACATAG AAATCGATTA CTTCCCTCCA GCAGGTAGTG TTGGCAGAGG CATCGCTTCG CTTTTCAACG GTATATTTGA ACGCATGATC CGCCAGGACA TTCAACGTTT TAAAACCTAT GCAGAGGAAA ACGATTTCAA ACAATATGCA GGACTGGCTT TATAG
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Protein sequence | MKNKLNNQIM EHLCTLSLPT NGKENIDQGE RIVSLLGGSW LLYKSLKKIG KHPFLGLQGV AAGGLMLYRG ATGICPVYQQ LGKDTTDPQA INITEDIVVN APIDKVYAFW REFSNLPKFM EHLKSVEEVS EKISFWTANT PGGLIDLNWN AEITREEKGS YLGWQSLEGS MIDNAGKIEF RETLNGTRTE LHIEIDYFPP AGSVGRGIAS LFNGIFERMI RQDIQRFKTY AEENDFKQYA GLAL
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