Gene Phep_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2623 
Symbol 
ID8253730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3064308 
End bp3065042 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content45% 
IMG OID644936272 
Productcyclase/dehydrase 
Protein accessionYP_003092888 
Protein GI255532516 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.502552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA AATTGAATAA CCAAATTATG GAACATCTGT GCACCTTAAG CCTTCCTACT 
AATGGAAAAG AAAACATCGA CCAGGGGGAA CGGATCGTTT CCCTGTTGGG TGGAAGCTGG
CTATTGTACA AGAGCCTGAA AAAAATCGGT AAACACCCCT TTCTCGGACT TCAGGGAGTA
GCTGCAGGTG GACTCATGCT TTATCGCGGC GCTACAGGTA TATGCCCGGT CTACCAACAA
CTTGGAAAGG ACACTACCGA TCCCCAGGCC ATCAACATTA CCGAGGATAT TGTAGTCAAT
GCCCCGATAG ACAAAGTTTA TGCTTTCTGG CGGGAATTTT CCAATCTCCC TAAATTCATG
GAACACCTGA AAAGCGTCGA AGAAGTAAGT GAGAAAATAT CCTTTTGGAC AGCCAATACC
CCCGGAGGAT TGATTGATCT GAACTGGAAT GCCGAAATTA CCAGGGAAGA AAAGGGATCC
TATCTGGGCT GGCAGTCATT GGAAGGTTCG ATGATCGACA ATGCAGGGAA GATAGAATTC
CGGGAAACCT TAAACGGGAC AAGAACTGAA CTGCACATAG AAATCGATTA CTTCCCTCCA
GCAGGTAGTG TTGGCAGAGG CATCGCTTCG CTTTTCAACG GTATATTTGA ACGCATGATC
CGCCAGGACA TTCAACGTTT TAAAACCTAT GCAGAGGAAA ACGATTTCAA ACAATATGCA
GGACTGGCTT TATAG
 
Protein sequence
MKNKLNNQIM EHLCTLSLPT NGKENIDQGE RIVSLLGGSW LLYKSLKKIG KHPFLGLQGV 
AAGGLMLYRG ATGICPVYQQ LGKDTTDPQA INITEDIVVN APIDKVYAFW REFSNLPKFM
EHLKSVEEVS EKISFWTANT PGGLIDLNWN AEITREEKGS YLGWQSLEGS MIDNAGKIEF
RETLNGTRTE LHIEIDYFPP AGSVGRGIAS LFNGIFERMI RQDIQRFKTY AEENDFKQYA
GLAL