| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2510 |
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| Symbol | |
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| ID | 8253617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2912429 |
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| End bp | 2913775 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936160 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003092776 |
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| Protein GI | 255532404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAATA CGGTTCTGAT CATTGATGAC GAAAAAAAAA TATGCAGCCT TTTGGCACGC
ATTATAGAAC TGGAAGGTTT TAAGGTCTTT CAGGCCGGTA CCGGAAAGGA GGGGCTCAAA
ATTCTTTCCA GTCAGGATGT ATATGTAGTC ATAAGCGATG TAAAACTTCC TGATATTAAC
GGTGTCGAGC TGGTCAGGGA AATTAAAAAA ATAAAGCCTT ATGCAGAGGT AATTAACCTG
ACGGCCTTTG GCACCATAGC CGACGGGGTA ATGGCCATGC GCAATGGTGC CTTTGATTAC
ATTACCAAAG GCGATGATAA CGATAAGATC ATTCCATTGG TTTACAAAGC TTTGGATAAG
GCAAAGCTGC AGTACCGCAT AAATGAGCTG GAAAACAAGG TAGGTAAAAA GTATAGTTTT
GAGGGGATTC TGGGCCGGTC GAAAGCCATC ATAGCAGCCA TAGAACTAGC CAGAAAAGTA
GCGGCCACAG ATACCACTGT ATTGCTTTTG GGCGAGACCG GAACGGGTAA GGAAGTGTTT
GCACAGGCCA TCCATTACGA AAGTCCCCGT AAAATGAAAC CCTTTGTTGC CGTAAATTGC
AGTGGTTTTA ACCATGAACT GCTGGAAAGT GAATTGTTTG GCCATAAACA AGGTGCCTTT
ACCGGGGCGG TTAAAGACAA GAAGGGTTTG CTGGAGGAAG CCCATGAAGG CACTATATTT
TTAGATGAAA TAGGAGAAAT GAACATGGAA CTGCAGGCCA AATTGCTGAG GGTATTGGAA
AACCAAACCT TTATTAAGGT GGGCGATACG CAGACCAGCA AAGTAAATGT ACGCATCATA
GCAGCTACCA ACAGAGATCT GAAACTGGAA GCAGAAGCAG GTAGGTTCAG GCTCGACCTG
TATTACCGGC TCTCTGTGTT TTTTATAGAG CTGCCTGCTT TATCGCAGCG TAAATCTGAC
ATTTTATTGA TCGCCAGGCA TTATCTGAAA GAGTTTGCAG ATAAGGTGAA CAAGCCCGAG
TTTAAAATGG ATACTGATTT TGAAGAATTG TTGTTGAAAC ACGCCTGGAA AGGTAACATC
AGGGAACTGA AAAATGTGAT GGAACGTGTG GCTATTCTGG CGGATGGGCA GGAACTCAGC
AGCAGCCTGC TGCCTTATGA GTTTCATCTG GGTGGACAAA TTCCTGAGAC TGATGCCTTA
AAAATGGAAT CCGTGGAAAA ACAGCACATC ATTAAAGTAC TGAAATACAC CCGTGGCAAT
AAAACAGAAA CCGCAAGACT ATTGGGAATT GGCCTGACTA CCCTGTACCG TAAAATTGAA
GAACTGAAAA TAGGCACGGC AGTGTGA
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| Protein sequence | MQNTVLIIDD EKKICSLLAR IIELEGFKVF QAGTGKEGLK ILSSQDVYVV ISDVKLPDIN
GVELVREIKK IKPYAEVINL TAFGTIADGV MAMRNGAFDY ITKGDDNDKI IPLVYKALDK
AKLQYRINEL ENKVGKKYSF EGILGRSKAI IAAIELARKV AATDTTVLLL GETGTGKEVF
AQAIHYESPR KMKPFVAVNC SGFNHELLES ELFGHKQGAF TGAVKDKKGL LEEAHEGTIF
LDEIGEMNME LQAKLLRVLE NQTFIKVGDT QTSKVNVRII AATNRDLKLE AEAGRFRLDL
YYRLSVFFIE LPALSQRKSD ILLIARHYLK EFADKVNKPE FKMDTDFEEL LLKHAWKGNI
RELKNVMERV AILADGQELS SSLLPYEFHL GGQIPETDAL KMESVEKQHI IKVLKYTRGN
KTETARLLGI GLTTLYRKIE ELKIGTAV
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