| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2473 |
|---|
| Symbol | |
|---|
| ID | 8253580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2867410 |
|---|
| End bp | 2868258 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644936123 |
|---|
| Product | RNA binding S1 domain protein |
|---|
| Protein accession | YP_003092739 |
|---|
| Protein GI | 255532367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.728532 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCAA TAGGACAATA CAACGATCTG AGAATTATAA AAAAAACAGA AGAAGGTCTG
ATTTTAACTG AAGGGGAAAA AGAGGTATTA CTGCCTTATG TTGATGTACC TAAAGCGGCT
GAAATTGGCG ATAACCTGAA TGTTTTTGTG TTTATGCAAA AAGATGGCAG GTTGCAGGCT
ACCACAAAAA GACCTTTGGC CTGCGTAGGT GATTTTGCTT ATCTGACTGT TGTTGATGAA
ACTGAAGATG GCGGTGCTTT TATGGATATC GGTTTGGGTA AGGATATTTA TGTACCTAAA
CGCGAACAAA AACGCCCGAT GTTTAAAGGT GACAAGCATG TGGTATATGT TTTTCTGGAT
GAGAGCAACG ACCGTATGCT GGCCTCGTCC AAGCTGCTGA ACTTTGTGGA AGAAGAAGAT
ATAGACCTTG AAGAAGGTGA TGAAGTGAGT TTACTGATTG TTGACCGCTC GGATATGGGT
TATAATGCAA TTGTTGACAA CAAATACATT GGCCTCTTGT ATACCAATGA GTTATTTGAT
GAACTGAACC CAGGGGAAAC CAGGAAGGGC TGGATCAAAA AGATCCGTGT AGAAGGTAAG
ATCGACCTGA GCTTACAGCC TATGGGCTAT GGGCATATCC TGGAAACCAA GGATGTATTG
CTGGAAGAGC TGAAAGACAG TGGCGGTGTA ATTGCTTTGG GCGATAAAAG TTCACCTGAA
GACATTTACC AGCGTTTTAA GATCAGCAAA AGTGCTTTTA AGAAAGCAAT TGGTGGTTTG
TATAAAGAAA GGCTGATCAC GATCTCTGAT CATGAGATCA GAGTTAATGT TGATCATGAA
GCTGAATAA
|
|---|
| Protein sequence | MIAIGQYNDL RIIKKTEEGL ILTEGEKEVL LPYVDVPKAA EIGDNLNVFV FMQKDGRLQA
TTKRPLACVG DFAYLTVVDE TEDGGAFMDI GLGKDIYVPK REQKRPMFKG DKHVVYVFLD
ESNDRMLASS KLLNFVEEED IDLEEGDEVS LLIVDRSDMG YNAIVDNKYI GLLYTNELFD
ELNPGETRKG WIKKIRVEGK IDLSLQPMGY GHILETKDVL LEELKDSGGV IALGDKSSPE
DIYQRFKISK SAFKKAIGGL YKERLITISD HEIRVNVDHE AE
|
|---|
| |