| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2228 |
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| Symbol | |
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| ID | 8253334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2576998 |
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| End bp | 2577684 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935877 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003092494 |
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| Protein GI | 255532122 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.814458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATAA ATAACTTAAG TAAAGACCTG GCTCCAATTA CCTCAAATAC GATGGCTGAT
ATTGTTGAGG TCAGGCTAAG AGAATACCTG AAAAAGAAAT CTTTTCGTCC TGGTGATGCC
TTGCCCAAAG AACTGGAATT AGCTGAGGCC CTGGATGTAA GCAGAAATGT GCTTCGTGAA
GCATTGAGCA GGTTGAGGAT GCTGGGCATG ATAGAGACCA AGAAAAAGCG GGGGATGATA
CTGGCAAGGC CAGATATACT GGGTACCTTT GAACGTGTAC TGGATCCGCT GATTATTGAT
ACAGAGACCT TACAGGATAT TTTTGAACTG AGACTGGTTT TGGAAATCGG GCTGGCAGAT
CTGATCTATA TCAGAAAAAC AGATAAAGAT ATTGCAGAAT TGGAAAGCAT TGCAAAGAAA
GAGGTAAACC ATGATAATTC TTTCCGGATT AAGAATGAGA TTGCTTTTCA TGGAAAGCTT
TATGAAATGT CGGGCAATGA CACGCTTAAA AGGTTCCAGA TCATGCTGCT TCCGATTTTT
GATTATGTAG TTACACTTGA AAAGAAACCT ACGATGGGAA AAGTAAACCA TCTTGACCTG
GTACAGATTT TAAAAACAGG AACAAAAGAT GATTTCAAAA AAGGAATGGA AGCACATCTT
AAACCTCACT TTGACAGGCT GAAATAA
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| Protein sequence | MAINNLSKDL APITSNTMAD IVEVRLREYL KKKSFRPGDA LPKELELAEA LDVSRNVLRE
ALSRLRMLGM IETKKKRGMI LARPDILGTF ERVLDPLIID TETLQDIFEL RLVLEIGLAD
LIYIRKTDKD IAELESIAKK EVNHDNSFRI KNEIAFHGKL YEMSGNDTLK RFQIMLLPIF
DYVVTLEKKP TMGKVNHLDL VQILKTGTKD DFKKGMEAHL KPHFDRLK
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