| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2219 |
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| Symbol | |
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| ID | 8253325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2560060 |
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| End bp | 2561523 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935868 |
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| Product | beta-Ig-H3/fasciclin |
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| Protein accession | YP_003092485 |
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| Protein GI | 255532113 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0214435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.586919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGGCC AAATTAAACC AAAGCAAATG AAACAGTATT TAAATTACCT GCTTACCGCA
ACCTTGCTGC TATTTGTACT TCAGGGTTGT AAAAGAGATT TCTCGGGAGC CAGATATGAC
AGTAATGATG AACTTCAGAT CATTGATTAT ATAGACAACA GGCCCGACCT GAGCACTTAC
CGCGAACTGG TAGACTATGT AAAAAAACGG AATCTGTTAA AAACAGCCGG GGCATATACC
GTATTCGCAC CAACAAATGC AGCTTTCACC AATTTATTTG CCCGCTTATC TTCAAACGGA
GAAAAGGTAA GTGCCATAAA GGACAAAACA CCGGAATTCT GGTTGAACTA TTTCAGCTAT
CACCTGTTAG ACAAAAAAAT AAATACCAAT GCCCTGGAGC AGGGACCACT ATCGGCCCCA
ACGGCACTAA ACAAGAAGTT TTTAATTGCG GATATCCGGG ATTCTTACAG CGCTATCAAA
CTGAATAATT TTGCCACCAT CCAGGAGTCT AATATCGAAA TGAGCAATGG CTATGTCAAT
ATTCTTGATG AAGTCCTCTC ACCACCTGTA GAAAGTATAC TGACTACCCT TCAAAAAACA
GGAAAATATA ATATTATGCT GGGCATTTTT GAAGAAACTG GCCTAACCAG ATACCTTAAA
GACAGTACCA TCACCCTGAT TATTGAACGT GACGAGGTAT TGCAAAAAAA CAATTTCAAT
AAAGCTTCCA TCAGTAACCT GGCCCAATGG GCAGCTTATC ATATTGTCCC CGATTCGGGC
TACTTCCTCA ACCAGCTAAC CAAACAGCGG ATCTATCCTG TATATAAAAA GGAAGCCCTC
AGTTTTAGTG TAAACGCCCG TGGCCAGTAT TTTATGAATG AGAAATATAA GTTCGACCAG
TCTATCGAGT TCGGTATAGA CCGCATCTGT TCCAATGGGG TATACCATTC CATGGACAAT
GTAGTAGCCA TCGAAACCGC GCTGCCTGCA ACCATACGGT TAAACCTGTT TCCGCCGGGC
AGCCCTTATG GCGAACAGAA TGTATTTACA GTGGCACCGG CACAGATCGT TTTAAATACC
GGAACACAAA GTTATCACCA GAACAAAGAA TTGAAAATTG TCGCATTCGA TGCACAACAG
GTTGGCGATT ACTTTTATTT CACCGTTCCC GACGTTCCGG TGGGAAAATA CAATATCCGC
GTGGTACACC GTGCCGGAAC ACGTGGTAAA TTCCTCACCA TCTATAATGA TGTAATTGTT
AAAAATGATA TCGACCTGTC TAAAACCGAC GGCACCTGGG CCGAATACAA CTATTACATC
TATAACAACT GCGGGATAAT TAATGTCGAA AACCGTTCTG ATGTGAAATT AACTTTTGCA
CTCACCGCTT TTGCGGCAGG AAAGAACGGA AGCTATTGCT GCGATGTGCT GATGGACATC
ATTGAACTGA TCCCTGTACC CTAA
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| Protein sequence | MNGQIKPKQM KQYLNYLLTA TLLLFVLQGC KRDFSGARYD SNDELQIIDY IDNRPDLSTY
RELVDYVKKR NLLKTAGAYT VFAPTNAAFT NLFARLSSNG EKVSAIKDKT PEFWLNYFSY
HLLDKKINTN ALEQGPLSAP TALNKKFLIA DIRDSYSAIK LNNFATIQES NIEMSNGYVN
ILDEVLSPPV ESILTTLQKT GKYNIMLGIF EETGLTRYLK DSTITLIIER DEVLQKNNFN
KASISNLAQW AAYHIVPDSG YFLNQLTKQR IYPVYKKEAL SFSVNARGQY FMNEKYKFDQ
SIEFGIDRIC SNGVYHSMDN VVAIETALPA TIRLNLFPPG SPYGEQNVFT VAPAQIVLNT
GTQSYHQNKE LKIVAFDAQQ VGDYFYFTVP DVPVGKYNIR VVHRAGTRGK FLTIYNDVIV
KNDIDLSKTD GTWAEYNYYI YNNCGIINVE NRSDVKLTFA LTAFAAGKNG SYCCDVLMDI
IELIPVP
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