| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2215 |
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| Symbol | |
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| ID | 8253321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2553027 |
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| End bp | 2553713 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935864 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003092481 |
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| Protein GI | 255532109 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAA ATGATTTAAG TAAAGACCTG GCACCAATAG CTTCAAATAC GATTGTAGAT
GTGGTAGAGG TCAGGCTCAG GGAATTTTTG AAGAAGAAAT CATTCCGTCC GGGTGATGCT
CTCCCAAAAG AACTGGAACT GGCAGAAGCA CTGGACGTGA GCAGAAATGT ACTGCGCGAA
GCCTTGAGCC GGTTACGCAT GCTGGGCATG GTGGAAACAA AGAAAAAGCG GGGAATGATA
CTCAGCAGGC CAGATATCCT GGGCACGTTT GAACGTGTAC TCGACCCGCT CATTATCGAT
AAAGAAACAC TCCAGGATAT TTTTGAGCTC CGGCTGGTAC TGGAAATGGG ACTGGCCGAT
CTGCTCTATA TCAGAAAAAC AGATAAAGAC ATTGATGAAC TTGAAAATAT CGCCAAAAAG
GAAGTAAATC ACGACAACTC ATTCCGCATT AAAAATGAAA TTGCCTTTCA TGGAAAGCTC
TATGAAATGT CGGGAAATGC TACGCTCAAA CGGTTTCAGA TCATGTTACT GCCCATTTTT
GATTATGTGC TGACCCTCGA AAAAAAACCA ACAAGAGGTA AGGTTACCCA CAAAGACCTG
ATCGAATTGC TCAGAACAGG ATCTAAAGAT GATTTTAAAA AAGGAATGGA AGCACACTTA
AAACCACATT TCGACAGATT GAAATGA
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| Protein sequence | MATNDLSKDL APIASNTIVD VVEVRLREFL KKKSFRPGDA LPKELELAEA LDVSRNVLRE
ALSRLRMLGM VETKKKRGMI LSRPDILGTF ERVLDPLIID KETLQDIFEL RLVLEMGLAD
LLYIRKTDKD IDELENIAKK EVNHDNSFRI KNEIAFHGKL YEMSGNATLK RFQIMLLPIF
DYVLTLEKKP TRGKVTHKDL IELLRTGSKD DFKKGMEAHL KPHFDRLK
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