Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2157 |
Symbol | |
ID | 8253263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2481265 |
End bp | 2481888 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644935806 |
Product | AAA-4 family protein |
Protein accession | YP_003092423 |
Protein GI | 255532051 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.475743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.644688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA GGAAACTTAT TTTACAAGGA GAAGGCACTA CACTGGATTT CAAAAAGACG ATCACCAGCA ATGAGAAGAT TGCAAAAAGC CTGGTTGCAT TTGCAAACAA CAAGGGTGGA CAGTTATTGA TTGGTGTTGC AGATGATGGC AGCATCAAAG GCGTAAAATC TGAAGATGAG GAACGGTATA TGATCACCAA ATCTGCCCAT CAGTTCTGCA AACCAGCGAT AGAACCTGAA TTTGAAGAAG TTTATGTAGA GGACAAACTG GTGCTGGTGG TAAAAATACC TGCTAGTGAT ACAAAACCGC ATTATGCGCT GGATGAAAAT AAAAAATGGT GGGTTTATTA CCGGGTAAAA GACAAAAGTT TACTGGCCAG TAAAATCATT GTTGATGTCA TTAAAAAAGG GAATGATAAA AACGGACAGC TGATCACTTA TACAGACCAG GAGAAAAAAC TATTTGAACA CCTTGGCGAA AAAGGCAGGA TTACCCTGAA GGAATTCAGT AAGCTTACCC GCAGTTCTTA CAGGCAGGCC CAAAAGATTT TGGTTAACCT GATCATAAGT GGACTGATTA CACCTCATTC TTCAGAAAAG GAGGAATATT TTACCACAAA CTAG
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Protein sequence | MNIRKLILQG EGTTLDFKKT ITSNEKIAKS LVAFANNKGG QLLIGVADDG SIKGVKSEDE ERYMITKSAH QFCKPAIEPE FEEVYVEDKL VLVVKIPASD TKPHYALDEN KKWWVYYRVK DKSLLASKII VDVIKKGNDK NGQLITYTDQ EKKLFEHLGE KGRITLKEFS KLTRSSYRQA QKILVNLIIS GLITPHSSEK EEYFTTN
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