Gene Phep_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2081 
Symbol 
ID8253185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2400307 
End bp2401641 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content43% 
IMG OID644935729 
Producthypothetical protein 
Protein accessionYP_003092348 
Protein GI255531976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0297326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.252224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTT TTAATACCAA AGAAGGCCAG TCCGAAAACT GGAAAAAATA CGAAAAAGTA 
CTGCTGCGCT TTCTGTTCCT CTATTTTTTC ATCCAGGCCG TACCGCTCGA CTGGAAGTTT
TACCGCGACC TGTTCTCCAT CAACTGGCTT GAACTGCCTT TTTTCGACCT GTTCAAACTG
AGTACTTATA GCCCACAGTT CTTTTCTTTA ACGGGCTATG CCAACTGGGC AGTTGTTTTG
ATCATTGCAA TAGCCGGTAC GTTTGTGTGG CCGCTTGTCT GCAAAGACCA AAAAACGGAT
TACCATAAGC TGTATTATTT GCTGCGCGTT ATTTTACGTT ACAGGCTTGC TATTGGCATT
ATCGCCTATG GGTTTATTAA ATTGTTTCCG TTACAAATGC CTTATCCTTC GCTCAGTAAC
CTGCACACCA ATTATGGTGA TTTCCTGCCC TGGAAAATTT ACTTCCATAC CCTGGGCATT
GCACAGCCTT ATGAAGTATT TTTAGGGGCC GTGGAGGTAC TGGCAGGGCT TCTGCTCCTT
TGCCGGCGTA CCACAACTTT TGGGGCCGGT ATTATACTTG GGTTTACCGG CAATGTGTTT
ATTGCAAATC TTTCTTACCA TGCAGGGCAG GAAGTGTACA GTGCTTACCT GAGTCTGATT
GCTGCGGTAT TGTTTGCTTA CGATGTACCC AGATTATACC GTTTGCTTAT CCTGCAGCAA
TATACCCTGG CCAATAAATT TCAACCCATT TTACATAAAA CCTTTGTAAA GGCCAGGTTT
GTACTCAAAA CACTTGCCCT GCTGTTTATT GTGCTGCTGG GTTTCAGCAC CTACGCCAAT
TATAAATATC ATCCCTATAA AATTCCACAA ACTGCAGGCT TAAAGGGTAG TTATGGATAT
TATAATGTCC GGGAGTTTAA ATTAAACAAC CGGACCATCC CTTATTCTAC AACAGATCCC
GACCGCTGGC AGAATGTTGT TTTCGAAAAA TGGGCAACCA TCAGCATCAA AACAGCCAGG
CCCATTCAAC TAGACAACTC TTACGGCGAT GGGTTTCATC AGCAAGATAT CGATCGTAAT
TATGAATCCG CTGGTGTTGC CGGCCGCCGT TATTATGCCT ACACTGCAGA TACCTTGTAT
AAAAAACTGC AGCTGGCCAA TAAAAATAAG CACTACCCGG CTGAACGCTA TTCCTTAACC
TATAATTTTT TAAACGATTC TACAATTGTG CTGCAAGGCG TAAACGGACA AAAGGATTCT
GTTTATGCCA TCCTGGACAG GATCAATAAG AAATACCTGC TGTTTGAAGG ACGCAGAAAA
CCAATTAAAT TATAA
 
Protein sequence
MSFFNTKEGQ SENWKKYEKV LLRFLFLYFF IQAVPLDWKF YRDLFSINWL ELPFFDLFKL 
STYSPQFFSL TGYANWAVVL IIAIAGTFVW PLVCKDQKTD YHKLYYLLRV ILRYRLAIGI
IAYGFIKLFP LQMPYPSLSN LHTNYGDFLP WKIYFHTLGI AQPYEVFLGA VEVLAGLLLL
CRRTTTFGAG IILGFTGNVF IANLSYHAGQ EVYSAYLSLI AAVLFAYDVP RLYRLLILQQ
YTLANKFQPI LHKTFVKARF VLKTLALLFI VLLGFSTYAN YKYHPYKIPQ TAGLKGSYGY
YNVREFKLNN RTIPYSTTDP DRWQNVVFEK WATISIKTAR PIQLDNSYGD GFHQQDIDRN
YESAGVAGRR YYAYTADTLY KKLQLANKNK HYPAERYSLT YNFLNDSTIV LQGVNGQKDS
VYAILDRINK KYLLFEGRRK PIKL