| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2041 |
|---|
| Symbol | |
|---|
| ID | 8253145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2358530 |
|---|
| End bp | 2359135 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644935689 |
|---|
| Product | DNA-3-methyladenine glycosylase |
|---|
| Protein accession | YP_003092308 |
|---|
| Protein GI | 255531936 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.117286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00692573 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC TTCCATTTTC TTTTTATCAG CATGAGGATG TGAATGCCCT GGCAGTGGGG
TTATTGGGCA AGCAATTGTT TACCCTGGTG GATGGCGAAT TAACTGCGGG TACCATTGTA
GAAACGGAAG CCTATAAAGG CGTGATTGAT AAAGCCTCGC ATGCCTATGG TGGCAGGTTT
ACGCCCCGTA CAAAAGTGAT GTACAGTTCC GGTGGCCTTT CTTATGTATA CCTTTGTTAC
GGCATCCATC ATTTGTTTAA TGTGGTTACT GCCCCCCAAG GAACACCACA TGCAGTACTG
ATCAGGGGGC TGGAGCCGCT TATCGGCATA GATGTGATGC TAAGGAGAAG AAATATGGAG
GTTGTAAGAC CGAACCTTAC CGCGGGTCCG GGAGCACTGG CCAAGGCAAT GGGCATAGAT
AAGCTGCTGA ACGAAAAAGA CCTGCTGGGC GATGAGATCT GGATTGAAGA TACTGGTCTG
AAGTTTAATG AAGAGACCAT TGCAGCAGTT CCGAGGGTAG GTGTGGATTA TGCAGAAGAG
CATGCACTTT TGCCATGGCG GTATTACATC AAAGGAAATC CTTATGTAAG TAAACCTAAC
CGTTAA
|
|---|
| Protein sequence | MAKLPFSFYQ HEDVNALAVG LLGKQLFTLV DGELTAGTIV ETEAYKGVID KASHAYGGRF
TPRTKVMYSS GGLSYVYLCY GIHHLFNVVT APQGTPHAVL IRGLEPLIGI DVMLRRRNME
VVRPNLTAGP GALAKAMGID KLLNEKDLLG DEIWIEDTGL KFNEETIAAV PRVGVDYAEE
HALLPWRYYI KGNPYVSKPN R
|
|---|
| |