| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1990 |
|---|
| Symbol | |
|---|
| ID | 8253094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2296296 |
|---|
| End bp | 2297117 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644935640 |
|---|
| Product | FecR protein |
|---|
| Protein accession | YP_003092259 |
|---|
| Protein GI | 255531887 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.328209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000107473 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAC CATTCCTAAG CGATGTTAAA ACCGGGGTAA TTGTTGATGC TTCAAAATTA
ACCTACAATG ATAACACACC GGTCATTTCG AACGAAGAGA GGAATCTCTT GAATAGCACA
GACAAGAGAT CTCTCCCATA CGGTCGAGAT GACGGGGCTG GACGAAGCCT TACCCTTACC
ACCCCCAGGG GTGGAACTTA TCAGGTGCGT TTGCCTGATG GCAGTAAAGT GTGGCTAAAC
GCCGCATCGA GTTTAACTTA TACTGCGCCG CTAAATGAGC GTGGCGGCAT ACGAAAAGTT
GAACTGAGTG GCGAAGCCTA CTTTGAAGTA TTTAGGAATA AAAATCAACC CTTTGTAGTA
ACTGCCAAAA ATTTGACAAC AACGGTATTG GGCACACATT TTAACATTAG TGCTTATGAC
GATGAAAATA GCACAAGAGC TACTTTACTT GAAGGAAGTG TAAAGGTGGC TGCTCCCGGG
CTTTCGGGGA AAGAAGCTGA AGCAGGTAGT GTAATCATAA AACCAAATCA ACAAGCCTTT
GTCACGGGTA GCACCGGTAT TAGTGTAAAG GAAGTAGATG CGGAACAAGC CGTAGCCTGG
AAAAATGGCA AATTCCGGTT CAGGGAAACC CCGCTACAAG AGGTGATGAA ACAACTGGCT
CGCTGGTATG ATGTAGAAGT GGTTTACCCT GATGGTATAC CGGATAAGAA ATTTACAGGG
GGCATTAACC GTAATGTAAA TGTTTCTGAA GCACTCGGTT TGTTTAAATT TTCGGGGCTT
AAGTTTACAA TAGAAAACAA AAAAATAATA GTGAAAAAAT AA
|
|---|
| Protein sequence | MVKPFLSDVK TGVIVDASKL TYNDNTPVIS NEERNLLNST DKRSLPYGRD DGAGRSLTLT
TPRGGTYQVR LPDGSKVWLN AASSLTYTAP LNERGGIRKV ELSGEAYFEV FRNKNQPFVV
TAKNLTTTVL GTHFNISAYD DENSTRATLL EGSVKVAAPG LSGKEAEAGS VIIKPNQQAF
VTGSTGISVK EVDAEQAVAW KNGKFRFRET PLQEVMKQLA RWYDVEVVYP DGIPDKKFTG
GINRNVNVSE ALGLFKFSGL KFTIENKKII VKK
|
|---|
| |