Gene Phep_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1979 
Symbol 
ID8253083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2283709 
End bp2284557 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content30% 
IMG OID644935630 
Producthypothetical protein 
Protein accessionYP_003092249 
Protein GI255531877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000661261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAA AAAATATTAT CATAGCGCCG TGTGGAAATA AATCATACTT ATATAAAGAT 
TCCTGGCTTA AGAATAGTGA GAACCGTAAT TTTGATATTT GCTTACTTTT TTATCATGAT
CAAATCAATA ATCCAAACAT AGCAGAAGAT GTAGATTATT TTTTTCATTT AAAGGGTTTT
AAATATGCAA TGATACATGA GCTCTTGACA GTTTTAAAAC CAGATTGGAT AAATCAATAT
GATTATTTTT ATTTTTTGGA CGATGATATA CTTATTGATA CAAATTCAAT AAATCAGCTT
TTCGATTTAA GTAGAGCATT TAATTCCAAT ATTAGTTGTG CTGCATTATC TGCAGATTCT
TTTTGTAGCT GGCCAATTTT TAAACAAGAT AGCAGGTCAT TTTTAAGATT TGTGGGGCAA
ATTGAAGTAA TGGCACCAGT TTTTAATGCA GAGACATTAA AATTGGTATT GCCAACTTTT
GTAGAGAACC GTTCTAGTTG GGGTTTAGAT GCAGTGTGGT CAAAACTTCT AAACTATAAA
AAAAATAAAA TGATAATTTT CGACTCCGTA ATCATGAAAC ATACCCTTCC GGTAGGTGGT
GGAGAGTTGT ATGTTAAAAT CGGTGTAAAC CCGCATGAAG AGTGGATGAG TGTTATAGAA
AAATATAACG CAAAAAAGGA AAATTTTGTT GAATACGGGC GGCTGAAATA TTTATCAATT
GATAATAGTC TATCCTATAA AATTTCAAAT CTTATATCCA GAGAACTTGG TACTGTAAAA
CGGAAGATAA TAGATTATGA TTTATTATCA AGAGTAAAAA ATCGTCTTGG ATTGGTTAAC
GAGAAATAA
 
Protein sequence
MNKKNIIIAP CGNKSYLYKD SWLKNSENRN FDICLLFYHD QINNPNIAED VDYFFHLKGF 
KYAMIHELLT VLKPDWINQY DYFYFLDDDI LIDTNSINQL FDLSRAFNSN ISCAALSADS
FCSWPIFKQD SRSFLRFVGQ IEVMAPVFNA ETLKLVLPTF VENRSSWGLD AVWSKLLNYK
KNKMIIFDSV IMKHTLPVGG GELYVKIGVN PHEEWMSVIE KYNAKKENFV EYGRLKYLSI
DNSLSYKISN LISRELGTVK RKIIDYDLLS RVKNRLGLVN EK