| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1977 |
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| Symbol | |
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| ID | 8253081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2281783 |
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| End bp | 2283225 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935628 |
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| Product | 2-keto-gluconate dehydrogenase subunit |
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| Protein accession | YP_003092247 |
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| Protein GI | 255531875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000336524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATATA GTCAATATGA TTTAATTGTA GTAGGTACAG GATTTGCTTC GAGTTTTTTT
TTAAAAAAGT ACCTTTCTAA ACCCGGTTCC AAAAACAAAA AGGTACTTGT TTTAGAAAAA
GGTCATTTTT ATCCTCATTC AGAACGCCTC AAAGTAGAAA AAGGACTGCC ATCAGCTTAT
CAAAAATATG CCTCGCCATG GCAGGAGAAT ATCGTCAACC TCAATGATAA AAAAGTATGG
CAGTTTACCA CGGCACATGG GGGGTCGTCC AATTGCTGGT GGGGCTGCAC GCCCCGGTTT
ATGCCCAATG ATTTTAAGCT AAAAAGTTTA TACGGAGTTG GGCAAGACTG GCCGGTAAGT
TACAATGAGC TGGATCCCTA CTATTATGAG GCAGAAGAGC TGATGATTGT ATCCGGACCA
GAAAATACCC CATTTCCCCG AAAAGGGAAG TATCCGCTGC CTCCACATAC CTTTAGCCTG
GTTGATAAAA TATTACATCA TAAATATGGG AACCAGTACA TCAGCCAACC CACCGCCAGG
GCAAGCCGGC AATTGGCTCA TAGAAACGGT TGCCTGGCCT ATAGCACCTG CCATACCTGC
CCGGTAAATG CCAAGTTTAC CATAGAAAAT GGAAATATGG GGGTGTATGA AGATAAACGC
ATAGAGATTA TATACGGTTG TGATGTTTAC AGCCTGGAAA CTGTTAATGA TATGGTGAAA
AATGTACTTT TTCAGCATGA CGGAAAAGAG CTGTCTGCCT CTGGAGAGGT GATAGTGCTT
GGTGCCAACC CATTTTTTAA TTCTAATATT TTGTTAAATG CAGGCGACAA AAACCCTTTA
ACTGGCCGGG GTATTGGGGA GCAGCTGGGC ATGCAGGTGC AAATTTATCT GGATGACCTG
AAAAATGTTG GGGGAAGCAG CTGGGTAAAC GCAAACGGAT ATATGTTATA CGACGGGGAC
CATAGAAAGG ACTTCGCAGC ATGTTTAATA GAGGTAAACA ACGCACCCTA TTACATTAGA
GTAGAAAGAG GGAAATATTT AAATGTAGCC AGTTTCAGGA TGGTATTTGA AGATCTGCCC
ATAAACAGCA ATCATGTAGC CATTACCTCA AATAAACTGA AACCAGAAGT TCATTTTAAA
GAAAGGTCCG AATACGCTTT AAAAGGTATA GAAAATATGA AATTGAAATT GCCCGGCGTA
TTGTCGTGCC TACCGGTTGA GAAGATTATT TACCAGGATA CAGAACCCAA TGAAGGACAT
ATCATTGGAG GGACACGGAT GAGCAATGAT AAAAACAATG GGGTAGTAGA CAAACACCTG
ATCCATCATC AATACCGGAA CCTATTTGTT TTAGGTGCAG GAGCTTTTAC CACCTATGGC
CCCTCAAACC CCACGCTCAC CTTATGTGCC CTATCCTTAT TTGCTGCCGA CAAAGTATTT
TAA
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| Protein sequence | MKYSQYDLIV VGTGFASSFF LKKYLSKPGS KNKKVLVLEK GHFYPHSERL KVEKGLPSAY
QKYASPWQEN IVNLNDKKVW QFTTAHGGSS NCWWGCTPRF MPNDFKLKSL YGVGQDWPVS
YNELDPYYYE AEELMIVSGP ENTPFPRKGK YPLPPHTFSL VDKILHHKYG NQYISQPTAR
ASRQLAHRNG CLAYSTCHTC PVNAKFTIEN GNMGVYEDKR IEIIYGCDVY SLETVNDMVK
NVLFQHDGKE LSASGEVIVL GANPFFNSNI LLNAGDKNPL TGRGIGEQLG MQVQIYLDDL
KNVGGSSWVN ANGYMLYDGD HRKDFAACLI EVNNAPYYIR VERGKYLNVA SFRMVFEDLP
INSNHVAITS NKLKPEVHFK ERSEYALKGI ENMKLKLPGV LSCLPVEKII YQDTEPNEGH
IIGGTRMSND KNNGVVDKHL IHHQYRNLFV LGAGAFTTYG PSNPTLTLCA LSLFAADKVF
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