Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1973 |
Symbol | |
ID | 8253077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2277456 |
End bp | 2278316 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644935624 |
Product | glycosyl transferase family 14 |
Protein accession | YP_003092243 |
Protein GI | 255531871 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000218843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGAATCG CCCACATCAT TCTTGCCCAT AAAAATCCTG CGCAATTGCT ACGGTTAACA AAAAAATTAG AACACAAAAT GAGCGATATC TATTTGCATA TTGACGCTAA AGTTCCTATT GCTCCGTTTG AGAGTATAAT CAGGGGATCT CAAATATTTT TTATAAAAAA CAGAGTGAAC TGTAACTGGG GTGGATTTAG TCTGTTGGAT ACGATAATTA AAAGTTTGCA GCAGGTAATT AACGGAAACG TACGTTATGA TTTTATAAAT CTGATCAGTG CCCAGGATTA CCCTCTAATG AATGCTGAGG ATATGTATAA TTTTTTGGAG AAAAGAATGG GAAAGATTTT CATTTCTTAT GACACCTCTC CAAATTCAGA ATGGTGGCAA CACGCAAGAA AAAGATATGA AAGATATCAT CTGACGGATT ATTCTTTTAC AGGGAAGTAC TTTGTCCAGA AAATAATTAA CATATTTTTT CGCAAAAGAA GTTTTCCTTT AAATGTTCCA ATGTACGGTG GAAATAAATC GTGTTGGTGG ACAATAACCG GAGATAGTGC TGCATACCTA TTAAATCAAC TTGACCCGAA ATCAAAATTA TATAAATTTT TAAGGTATTG TTGGGGAAGT GAGGAATTTG TGATATCCAC CTTATTAATG AATTCTCAGT TCTCTACTCA GGTTGTTAAT GAAAATTACC GTTACATTGA TTGGTCTGAG GGTAAGTCAA GCCCCAAATT GTTACTTGTT GAAGATTTAC AAGCAATACA AGCTTCGAAA ATGCTGTTTG CAAGAAAGTT TGACAATGAA ATTGACGTAA AAGTCATGGA CTTGTTAGAC AATGACAGTG CTTCACATTA A
|
Protein sequence | MRIAHIILAH KNPAQLLRLT KKLEHKMSDI YLHIDAKVPI APFESIIRGS QIFFIKNRVN CNWGGFSLLD TIIKSLQQVI NGNVRYDFIN LISAQDYPLM NAEDMYNFLE KRMGKIFISY DTSPNSEWWQ HARKRYERYH LTDYSFTGKY FVQKIINIFF RKRSFPLNVP MYGGNKSCWW TITGDSAAYL LNQLDPKSKL YKFLRYCWGS EEFVISTLLM NSQFSTQVVN ENYRYIDWSE GKSSPKLLLV EDLQAIQASK MLFARKFDNE IDVKVMDLLD NDSASH
|
| |