Gene Phep_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1973 
Symbol 
ID8253077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2277456 
End bp2278316 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content35% 
IMG OID644935624 
Productglycosyl transferase family 14 
Protein accessionYP_003092243 
Protein GI255531871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000218843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATCG CCCACATCAT TCTTGCCCAT AAAAATCCTG CGCAATTGCT ACGGTTAACA 
AAAAAATTAG AACACAAAAT GAGCGATATC TATTTGCATA TTGACGCTAA AGTTCCTATT
GCTCCGTTTG AGAGTATAAT CAGGGGATCT CAAATATTTT TTATAAAAAA CAGAGTGAAC
TGTAACTGGG GTGGATTTAG TCTGTTGGAT ACGATAATTA AAAGTTTGCA GCAGGTAATT
AACGGAAACG TACGTTATGA TTTTATAAAT CTGATCAGTG CCCAGGATTA CCCTCTAATG
AATGCTGAGG ATATGTATAA TTTTTTGGAG AAAAGAATGG GAAAGATTTT CATTTCTTAT
GACACCTCTC CAAATTCAGA ATGGTGGCAA CACGCAAGAA AAAGATATGA AAGATATCAT
CTGACGGATT ATTCTTTTAC AGGGAAGTAC TTTGTCCAGA AAATAATTAA CATATTTTTT
CGCAAAAGAA GTTTTCCTTT AAATGTTCCA ATGTACGGTG GAAATAAATC GTGTTGGTGG
ACAATAACCG GAGATAGTGC TGCATACCTA TTAAATCAAC TTGACCCGAA ATCAAAATTA
TATAAATTTT TAAGGTATTG TTGGGGAAGT GAGGAATTTG TGATATCCAC CTTATTAATG
AATTCTCAGT TCTCTACTCA GGTTGTTAAT GAAAATTACC GTTACATTGA TTGGTCTGAG
GGTAAGTCAA GCCCCAAATT GTTACTTGTT GAAGATTTAC AAGCAATACA AGCTTCGAAA
ATGCTGTTTG CAAGAAAGTT TGACAATGAA ATTGACGTAA AAGTCATGGA CTTGTTAGAC
AATGACAGTG CTTCACATTA A
 
Protein sequence
MRIAHIILAH KNPAQLLRLT KKLEHKMSDI YLHIDAKVPI APFESIIRGS QIFFIKNRVN 
CNWGGFSLLD TIIKSLQQVI NGNVRYDFIN LISAQDYPLM NAEDMYNFLE KRMGKIFISY
DTSPNSEWWQ HARKRYERYH LTDYSFTGKY FVQKIINIFF RKRSFPLNVP MYGGNKSCWW
TITGDSAAYL LNQLDPKSKL YKFLRYCWGS EEFVISTLLM NSQFSTQVVN ENYRYIDWSE
GKSSPKLLLV EDLQAIQASK MLFARKFDNE IDVKVMDLLD NDSASH