Gene Phep_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1971 
Symbol 
ID8253075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2275655 
End bp2276467 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content31% 
IMG OID644935622 
Productglycosyl transferase family 11 
Protein accessionYP_003092241 
Protein GI255531869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.433733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000182998 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAGGAG TACAATTCAA TGGAAGATTG GGAAATCAAA TTTTTCAATA TGCATTTTAT 
CAATATTTGA AAACAAATAA TAAGCGGATA TTTTTCTTTT TCTCAAATCC CACTGACAGT
TATCTTACCA AATATTTTGA TATTGATCGT ACTGAAGATT ACTGTTTAAC CTATAAGGCT
TTATTTATTG TTCCGAAGAT TTTGAATAAA ATTCTAGCAT CGAGACAAAT TTATATTCAG
AATATCCAGA TCCCCAAACC AGTAAGCGTA AGAAACTGGA CCATTTACAA AGGTTTTTTT
CAAACAGACT GGTATGTTAA AAATATCGTT GGAGAGTTTG GCCTTAAAAT TAAGCAAGAA
TATCAGCAGA AGTTTGACGA AAAATTTGGC GAGGTATTTA AATTGAATAA GACCATTGCG
GTTCATATCC GAAGAACAGA TTATTTAAAA TATGGTAAAA GAGATATTTC TTTGCCGATA
GCGTACTTTA AAAGCAGATT GGATGCATTG CAAAACATTG ATGATTATAA GATTTTCTTT
GTCAGCGATG ACATTGCTTA TGTTTCCTCT TATTTTGGAA AGAATGCCAA CTATATTTTT
TCAGAAAATG ATGAGATAAC TGATTTTCAG ATTATTAAGG CTGCAGATAT TTCCATAATT
TCTAACAGTA GCTTTGCGTG GTGGGCTTGT TATCTTTCTG CAAATAAAAG AAAGATTACT
TATGCTCCAA AAAACTGGTT GGGCTTTAGA ATAGGTAAGG AACATCCTAA AAAAGTCATG
ACTGATCGTT TTATTTGGTG TGATGTCCAA TAA
 
Protein sequence
MVGVQFNGRL GNQIFQYAFY QYLKTNNKRI FFFFSNPTDS YLTKYFDIDR TEDYCLTYKA 
LFIVPKILNK ILASRQIYIQ NIQIPKPVSV RNWTIYKGFF QTDWYVKNIV GEFGLKIKQE
YQQKFDEKFG EVFKLNKTIA VHIRRTDYLK YGKRDISLPI AYFKSRLDAL QNIDDYKIFF
VSDDIAYVSS YFGKNANYIF SENDEITDFQ IIKAADISII SNSSFAWWAC YLSANKRKIT
YAPKNWLGFR IGKEHPKKVM TDRFIWCDVQ