Gene Phep_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1903 
Symbol 
ID8253007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2200864 
End bp2201577 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content45% 
IMG OID644935554 
Producthypothetical protein 
Protein accessionYP_003092173 
Protein GI255531801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.124132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA AAATATCCCT TATAGCCTTA TTGATACCTG TTTTATTTAC AGGCTGCGAA 
AACAAATGTA TTGAAGATGC CGGCCGGCAT GTGAGCAGGG CGGTATCTGT AAAGAATTTT
GATCGGATAA AAGTAGAAGG GGCCATTAAA CTGGTGATGG TGCAGGACAG CAGTTACAAA
ATCCAGGTGG ATGCCGATTC CAATATCATT ACTTACGTGA AGGCCGATGT TTCCGGTTTT
GAATTAAGGC TGAAACTGGA TTACGACCAC TATTGTGGTA CAGATTCGAT TGTGGTAAGG
GCAGGAATAG GGGAGTTGAG GTCGCTGAAG CTGGACGGTG CGGTGAAAGC TGTTGGGGAA
GGGCGTATTT ATGCCGATGA CCTGGACCTT TCTTTTTCGG GCGCAGCTGA TGTGAACATG
AATTTAAGTG CAAGGAAAGT AGTAACAAGG GTTGATGGTG TAGGTAAAAT TGCGCTGAGC
GGACAGGCCG GGGTGCACGA CCTGAAAATT AACGGTACGG CCAGGGTGGA TGCCTTTGAT
TTTATAGTTG GGATATACAA TATTGATACA GATGGCAGTG GTAAGGCCAA TATCAATGTG
CTGAATGAGC TGAAAGTGAA AACTTCAGGA TCGAGTGAGA TCTATTATAA AGGCAATCCC
AAAAAGGTGG ACGAGAAAAA ATCGGGGGCC ACAAAACTGG AGAAAGTAAA TTAG
 
Protein sequence
MMKKISLIAL LIPVLFTGCE NKCIEDAGRH VSRAVSVKNF DRIKVEGAIK LVMVQDSSYK 
IQVDADSNII TYVKADVSGF ELRLKLDYDH YCGTDSIVVR AGIGELRSLK LDGAVKAVGE
GRIYADDLDL SFSGAADVNM NLSARKVVTR VDGVGKIALS GQAGVHDLKI NGTARVDAFD
FIVGIYNIDT DGSGKANINV LNELKVKTSG SSEIYYKGNP KKVDEKKSGA TKLEKVN