Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1882 |
Symbol | |
ID | 8252986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2174068 |
End bp | 2174793 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935533 |
Product | radical SAM domain-containing protein |
Protein accession | YP_003092152 |
Protein GI | 255531780 |
COG category | [R] General function prediction only |
COG ID | [COG1427] Predicted periplasmic solute-binding protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAGA TTAAGATTTC TGCCGTTTCC TATACCAATA CCAAGCCTTT TATTTATGGA ATCGAACATT CAGCTTTGCT GGACCAGATT GACCTGAGTC TGGATATTCC TACAGATTGT GCAGCTAAAT TAATTGACGG ACAGGTAGAT ATAGGTCTGA TTCCCGTAGC TGCAATACCT GATGTTCCTA ACGCCCATAT TGTAGCCGAT TATTGTATTG GCTCGGTTGG GGCAGTAAAT TCTGTGTTCA TTTTTAGTAA GGTACCTGTT GCCGAGATCG GCACAGTAAA ACTGGATCTC CATTCCAGGA CCTCTAATCA CCTGGCTAAA GTTTTACTGA AATTCCATTT TAAACAACAG GTAAGTTATA CCACCGATCA GGCAGCAGAA ACAGATGCCA TCGTGTTGAT TGGCGACCGT ACCTTTGGGC GAAAAGAAGA ATTTGCTTAT GCCTACGATA TGGGGCAGGA ATGGATGAAT TTTACAGGTT TGCCATTTAT GTATGCCGCA TGGGTAGCCA ATAAGCCTAT TCCGCAGGCT TTTATCAATG ATTTTAATGA GGCCCTGGCC TTCGGCCTGT CCAAAAGGAA AGCACTTTTA CAGGAATTGC CCGAGCAGGC GAATTTTGAT CTGGAGGATT ATCTGCTCCA TAAACTGGAT TTTGAGCTTA CAGCCAAAAA ACGTGAGGCA CTGGAGCTCT TCCTGATGTA CATTACAAAA TTATAA
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Protein sequence | MNKIKISAVS YTNTKPFIYG IEHSALLDQI DLSLDIPTDC AAKLIDGQVD IGLIPVAAIP DVPNAHIVAD YCIGSVGAVN SVFIFSKVPV AEIGTVKLDL HSRTSNHLAK VLLKFHFKQQ VSYTTDQAAE TDAIVLIGDR TFGRKEEFAY AYDMGQEWMN FTGLPFMYAA WVANKPIPQA FINDFNEALA FGLSKRKALL QELPEQANFD LEDYLLHKLD FELTAKKREA LELFLMYITK L
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