Gene Phep_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1790 
Symbol 
ID8252893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2082978 
End bp2083430 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content35% 
IMG OID644935441 
Productmembrane protein 
Protein accessionYP_003092061 
Protein GI255531689 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0469935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000576942 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCTT TACTTCTTCT CTTAGGAACG TTTTTATTTT CAATCCTTTA TTTTTTGATT 
TTCGACAAAG ACATTGACTA TAAATACGCT GGAAGGATTA GTATGTGCGC GATGCTACTA
TTTACTTCCA TCGGGCATTT TGTACTAAAA AAGGGAATGG AAAACATGGT TCCGGAACGT
ATACCATTCA AACCTCACAT TGTCATTGCA ACAGGTATTT TTGAAATTCT TGCAGGATTT
GCTTTATTAG CACCTACTTA TTATAAAGCT GCCGGATGGT TCCTAATTGC CTTCTTTGTG
CTCATTTTAC CAGCTAATGT AAACGCATCT ATACATCATA TTAATTATCA AAATCCGGAA
ATACCAGGGC CCGGATTGAA ATATTTATGG TTCAGAATTC CGTTGCAAAT ATTGTTTGTA
GCCTGGATCT ATTTTACAGC CATCAAAACC TAA
 
Protein sequence
MKPLLLLLGT FLFSILYFLI FDKDIDYKYA GRISMCAMLL FTSIGHFVLK KGMENMVPER 
IPFKPHIVIA TGIFEILAGF ALLAPTYYKA AGWFLIAFFV LILPANVNAS IHHINYQNPE
IPGPGLKYLW FRIPLQILFV AWIYFTAIKT