Gene Phep_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1737 
Symbol 
ID8252839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2050539 
End bp2051495 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content39% 
IMG OID644935388 
Producthypothetical protein 
Protein accessionYP_003092009 
Protein GI255531637 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0033036 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAC AAACCAGCAC TGCAACACAC CCAAAACAAA AAAGAGAACC TAAGCCTACA 
ACTTTCATTG ATGCCTTTGT CGACTTTAGC TTTAAAAGAT TGTTCGCCAC AGAAGAAAGT
AAACCAATTC TGATAGGTCT GTTAAACCAC CTCTTTAAAG GCAGAAAATA CATTACTGAA
ATTGAATACG GGAAAAATGA ATTCCCCGGT GAGATAGCCC AGGAAGGCGG AGCCGTATTT
GATGTTTATT GTACCGATGT TAACGGCAGC AAGTTCATTA TCGAAGTCCA ACGTGGCAAC
CAGGAGTATT TTAAAGAGCG GGCGCTATTT TATGTCTCCA GAGCAATCAG TGAACAAGCT
CCAAAAGGCG ATAGAAAGGG CTGGGCTTAC AAGCTTACAG AAGTGTACCT GCTTGCATTT
TTAGAAGACT TTAACCTGCC GGATAGCCCA AAATCTGAAT ATGTACAGGA TATCTGTCTC
GCTAACAGGC ACACTGGCAT AATATTCTAT GATAAAGTAG GCTTTATATT TATTGAAATG
CTTAATTTTG TTAAAGGGTC TGATGAATTG TATACGGAGC TGGATAAATG GTTATATGCA
TTGAAGCACT TAACCGAATT TAAACAACGT CCGGAATACT TATCCGGCCC GGAATTTGAT
CAGTTATTTA CCCTGGCTAA TTATGCCAGT TTAACACCAG AGGAACGTGA TATGTACAAT
TCAAGTTTAA AGCGCAAGTG GGATAACAAA AATGTACTGG ATTACGCGGT TAAAAAAAGT
CTGGAACAAG GTTTGGAACA AGGTCTGGAA CAAGGTCGTG AACAGGGTCG TGAACAGGGT
ATACATAAAA AAGCAATTGA GATCGCTCTT GAAATGCTAG TTAACAAATA CCCAATAGAA
GAAATCATTA AGCTTACCAA ACTTTCAAAA GAAGAAATCC AGTCCCTTCA AAAATAA
 
Protein sequence
MQEQTSTATH PKQKREPKPT TFIDAFVDFS FKRLFATEES KPILIGLLNH LFKGRKYITE 
IEYGKNEFPG EIAQEGGAVF DVYCTDVNGS KFIIEVQRGN QEYFKERALF YVSRAISEQA
PKGDRKGWAY KLTEVYLLAF LEDFNLPDSP KSEYVQDICL ANRHTGIIFY DKVGFIFIEM
LNFVKGSDEL YTELDKWLYA LKHLTEFKQR PEYLSGPEFD QLFTLANYAS LTPEERDMYN
SSLKRKWDNK NVLDYAVKKS LEQGLEQGLE QGREQGREQG IHKKAIEIAL EMLVNKYPIE
EIIKLTKLSK EEIQSLQK