| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1729 |
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| Symbol | |
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| ID | 8252831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2046259 |
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| End bp | 2047077 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935381 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003092002 |
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| Protein GI | 255531630 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.356127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00130809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATTA ATGAATTGAT GAATAAGAAG GTTGAGCACT TTTACGATAA GTTTTATGAC
TGGGTACTGT TAAAAGGCCC AGTCGTTTTG CTGGGGATTG CTGTCTTGAT CATTGGTCTG
TGGCTGATCA GGATATTTGC ACGCTGGATG CGAAACAGGA TGCAGCATAA AAAAATCAAC
AGTTCATTGA AACCTTTTTT TCTGAGCGTG GCCGTTGTGG TGCTTAGGAT ACTGCTGATT
TTTTTAGTGA TGCAGATTAT GGGCATTCAG CTGACCATTT TTGCTGCCCT GGTCGGTGCG
ATTGGTGTTG CTGCCGGCCT GGCACTGTCT GGTACAATGC AGAATTTCGC CAGCGGTGTA
TTGATCTTGT TATTAAAGCC ATTCCGCGTT TCGGATAATA TAATAGCCCA GGGGCAGGAG
GGTACGGTAT CTTCTATACA ACTCTTCTTT ACTGTGGTGA CTACTTTTGA CAATAGAACG
GTGATTATCC CCAATAGTAA ACTCTCTAAC GAAGTCATCA TTAACATCAG TGCGATTGGC
AGCAGGAGAC TGGATCTGGA ACTAAAATTG AATTACGGGA TTGACCTGTC CAAGGTTAGA
CAGGTGATCG ATGAAACCAT CACAGAATCA AAATCAGTTT TGAAAACCCC GGAGAAAAGG
GTGGGTGTAT CTTTATTGGA AACGGATGGT TACAAGGTGA TGATCAATGT CTGGCTGAAT
TCCCATGGCT TTCACGATGC CAGGCTCATC TTTCAGGAAA ATTTATTGGA AAATCTGAAA
TCTTCGGGTA TTAAGCTACC GGGAATGGAT TCAAAGTAA
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| Protein sequence | MQINELMNKK VEHFYDKFYD WVLLKGPVVL LGIAVLIIGL WLIRIFARWM RNRMQHKKIN
SSLKPFFLSV AVVVLRILLI FLVMQIMGIQ LTIFAALVGA IGVAAGLALS GTMQNFASGV
LILLLKPFRV SDNIIAQGQE GTVSSIQLFF TVVTTFDNRT VIIPNSKLSN EVIINISAIG
SRRLDLELKL NYGIDLSKVR QVIDETITES KSVLKTPEKR VGVSLLETDG YKVMINVWLN
SHGFHDARLI FQENLLENLK SSGIKLPGMD SK
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