| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1684 |
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| Symbol | |
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| ID | 8252786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1991535 |
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| End bp | 1992401 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935336 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091957 |
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| Protein GI | 255531585 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.465215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.801994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTTA TTTGTAGTAC ATCTATACTA ACTGCCGTGA ATATCAAACC CTTTGTCCCT
CATCCGGCCT TGCAACCCTA TGTATTGGGT TATGCATTTG TAGAATTGGA AGAGCTCATT
ACCAAGCAAA ACCCCGTTCA TATTTTTCCA GTCGAATATA CAGTTATTTG TTTTGCACTG
GATGAGCAGA AGTTAATTAA GGAGCTTCAT ACCAATGAAG CCACTACCCA CCCGTTTTGC
TACGTAGGCT TTTTGAACAA ATTACGTTCC TTCGAAACTT TTACCAAACG ACTGGTTCAA
ATCTACCTCA AACCTTATGG AGGATATAAA CTACTGGGCA TACCCCAACA CCATTTTACC
AATTGCGCCA CTAATGTAGA AGCGATCTTT CCACATCTTA ATGCTATGGT TAACCAAATG
CAGGACAACG CCGGCTCACC AGAAAAAGTG GTAGATATTC TTGACAAATG GCTACTTCAA
AGACTGGAAC AAACAAAAAA AATCTATGTA GACCGTATGA TCTATGCCTG CAACCTCATA
CAGGCTTCGG CCGGCAACAT GTCCATACCA GAGCTCTGTA CCAAAGCGGC AATGTCGCCA
ACAACCTTAC GTGATCATTT TAAAGAGAAA ATCGGTTTTA GCCCTAAAAC TTTTAGCAGA
ATTGTACGCT TCAACCAGAT GAACAGATTT CTTTGCAGCC ATTCAGACAC CAAATGGACA
CAACTGGTTG ATAAATTCCA ATTCTTTGAC CAAAACCATT TTATTAAAGA GTTTAAATAC
TTTTTTGGCT GTACCCCCTC ACAACTTCAT AAAATAGGTG AATTGAGTTT TACAGGACAA
CTCCTTGAAA ATTTGGACAT CCAATAA
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| Protein sequence | MFFICSTSIL TAVNIKPFVP HPALQPYVLG YAFVELEELI TKQNPVHIFP VEYTVICFAL
DEQKLIKELH TNEATTHPFC YVGFLNKLRS FETFTKRLVQ IYLKPYGGYK LLGIPQHHFT
NCATNVEAIF PHLNAMVNQM QDNAGSPEKV VDILDKWLLQ RLEQTKKIYV DRMIYACNLI
QASAGNMSIP ELCTKAAMSP TTLRDHFKEK IGFSPKTFSR IVRFNQMNRF LCSHSDTKWT
QLVDKFQFFD QNHFIKEFKY FFGCTPSQLH KIGELSFTGQ LLENLDIQ
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