Gene Phep_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1683 
Symbol 
ID8252785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1990965 
End bp1991462 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID644935335 
Producthypothetical protein 
Protein accessionYP_003091956 
Protein GI255531584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.942243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TCATCCCTAT TTGTTTTGCA TTAGCCACTG GAACAACTGC TTCCGCACAG 
CAGCCCCAAC TGCAGCGCTC GGTTATCGCC AGCGCAGGAG GTTTTGCACA AATCAACAGC
AGCATTGTCC AATACACCAT TGGCGAGCCG CTGGTCAGCA GCCTGGAAAG TCCACCTATA
CTACTTAGCC AGGGTTTCCA GCAGCCCGAA ATTGCCGGTA ATGAAATAGA ACCCGAAATC
AACTTTGTGA ACAGCTTTAT CGTTTATCCA AATCCGGCAA GCGGGTCAAC CAATGTAGAA
TTTGACCTGT TGAAAGACGG CAAGGTTAAC ATGCAACTGG TTAACAATGC CGGACAAACA
GTCAGAAATT TTTCCGTAAA CCTTCTGGCA GGTAAAGTAA AATACCCACT GCTGATATCC
GGTCTTTCTT CCGGCCTTTA TTACGTAGTG CTAAAAGCTG CAAACAGGCA GTATGCAGAG
AAATTAGTTA TACAATAA
 
Protein sequence
MKTIIPICFA LATGTTASAQ QPQLQRSVIA SAGGFAQINS SIVQYTIGEP LVSSLESPPI 
LLSQGFQQPE IAGNEIEPEI NFVNSFIVYP NPASGSTNVE FDLLKDGKVN MQLVNNAGQT
VRNFSVNLLA GKVKYPLLIS GLSSGLYYVV LKAANRQYAE KLVIQ