| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1659 |
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| Symbol | |
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| ID | 8252761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1960526 |
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| End bp | 1963867 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644935312 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091933 |
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| Protein GI | 255531561 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.286371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAA ATTATATCAT CAAACCTGAT ATACCGAAGA GGTATGTCTA TAAGATACTG
CTTGTTATGC GCCTAACCAC CGTCATTCTT ATTGCCAGTA TGTTGCAGGT AAGTGCATCT
TCTTTAGCGC AAAAGTTCAG CTATGTGAAA AAAGATGTGC CCCTGTTGCA AGTTTTTAAG
GAACTCAAGA AACAAACCGG CTATAACATA CTCTGGAACG AAAAGGAAAT AAATGTTACA
ACTTTAATAG ATGCCAATTT TAAAAAATCG AGCATAGAAG AAGTAATGGA TGCCTGTTTG
GGGCAACTCC CCTTTTCTTA TACAATTAAC GATAAAATGG TTCTTATCAA ACAGAAAGAG
CTTTCTTTTC GTGATAAGAT CACTAGCTTT CTCGCTGCAA TTGATGTTCG TGGCCGTGTG
CTTGATGAGA ATGATGCACC ATTGGTGGGC GCGGTTGTAA AGGTCAAAGG AACAAAACAA
GCTACATCAA CAAATAACAA TGGCGATTTT GTAATGAATG GTGTTGATGA AAAAGCAACG
TTAGTGGTTT CCTTTTTGGG ATATGAGGCT AAGGAGATAG CAGCCTCGAA AAATGTAGGA
AGCATTAGAC TAACCCTCAA TACAGATAGA CTTGAAGAGG TGCAGATAAA TGCTGGGTAC
TATACAGTAA ATGATAGAGA GCGAACCGGG AACATTTCTA GAGTTACTGC GAAGGAAATC
GAAAAACAGC CGGTTAATAA TGTTGTCGCC GCCTTACAAA ATCGCGTCCC GGGTTTACAA
ATTGTTCAAC AAACTGGTGT TCCAGGAGGT GGTTTTACAG TACAAATTAG AGGTAGAAGT
AGTATAAATT CATTTGTTGG AAATTTGCCA TTATATATAA TTGATGGAGT AATTTATCCG
TCTACAACAG TTTCCGCCAA TTCAACAATA GGGATATTTG GCGGGAAAAC AGGTTATGGA
GCAAGTCCTC TAAGCAGTCT AAATCCCGGC GATATTGAGA GCATTGAAAT ATTAAAAGAT
GCTGATGCTA CTGCAATCTA CGGTTCTCGT GGAGCAAATG GCGTCATACT AATTACTACA
AAAAAGGGTA TTTCTGGACT AACAAAAGTG CGTGCTAATG TATCCCAAGG ATATAGCGAG
GTTGGTCATA GAATTGATCT ATTAAATACA CAGGAATATC TTGAAATGCG ACGAGAGGCA
TTTAAAAATG ATGGTTTATC TCCTTCAACA ACAGATTACG ATATAAATGG AACATGGGAT
CAGAATAAAT ATACGGATTG GCAAAAAACA TTTATAGGGA ATAAAGCACA TAATACAAAT
GCGTCTCTGG GTGTAACAGG AGGAAATGAA AAAAGTAATT ATTTAATAGC AGGAAGCTAC
AGCAAAGAAG GCACTGTTTT TCCAGGAAAC TTTGGAATTG ACAAGGCGGG CATTAGTTCA
TCTATAAATT TAGGTACTCC ATCAGAGCGC TTTAATGCTA ATTTTAGTGC AAGCTTCAAT
CATATTAAGC AAAATCTGCT AAATACAGAC TTAACAATTT ATATGTTCTT GACACCTAAT
TTCCCAGATT TGCGTGATCA GTATGGACAG CTTAATTATA GCAATAATAC CATTTCTCTT
AACCCATTGG TTTTCTTATC GCAACCTAAT AATGCAAATA TGAATACTTT GATAGGGAAT
GTTAGTTTAA GTTATAAATT TCTAAAAAAT CTGGTGTTCA AAACTGCATT AGGTTACTCT
TCAATTTTGA GGACAGAGTT TGTAAAATTC CCATTAGCAG CAATCAATCC AGCTCAAAAT
CCAACGTCTG AATCTAGAAT GTCCTTATTC TCTGACAACC ATAATGATAC CTTCATGTTA
GAGCCCCAAA TAGCATACAA CGGTGACTTC TTGGGAGGCA AAATAGAAAT ACTTGGAGGA
ATGAGTCTTC AAAAAAATGA CGCTCAATTT CGTACAATTC AAGCCTCAAA TTATTCTAGT
GATGAGATAA TGGATAATAT TTCAGGTGCA GCACTTTTAA CCAACCTAGG GGCCACTAAT
TCAGAATATA AATATATTGC TGGATTCGGA AGATTTAATT ATAAATTATT AGATAAATAT
TTTATTAATC TTACTGCAAG AAGAGATGGT TCTAGTAGGT TTGGGAAAGA TAAACAATTT
GCAAATTTTG GTGCAGTTGG TGCTGCATGG ATCATAAGTG AGGAAAATTT TCTAAAAAAA
ATTCCCTTTA TTACTTTTGC TAAGTTAAGA GCAAGCTATG GGATAACGGG TAATGACCAA
ATTGGGAATT ATGGTTATCT GCAACTATGG ACGTCTACTG GAACCTATCA AGGTAAAACT
ACGGTTACTG CAAGTGGGGC AGCACCAAAT CCTGACTTTT CTTGGGAAAC AAATAAGAAA
GCTGAAGCTG CAATACAATT AGGCTTCTTA GAAGACATGA TTAATTTAGA AATTTCATAC
TATCGGAACC GTTCATCAAG TCAGCTATTA TCAAAGACGC TACCACCAAG TACAGGATTA
ACTTCTCTTT CTGGAAACCT ACCTGGAATA GTGCAAAATA ATGGATGGGA ATTTAACAGT
ACATTTAAGA TTATCAATAC ATCTAATTGG AATTGGTCTT TAGGTTTTAA TTTAACTATT
CCTAAAAATA AGTTAGTTTC ATATCCCGGT TTAGGAACTA GTTCTGATGC TATAAATTAT
CAAATCGGTG AGCCGCTTAA TATCTTAAAA ACGTCAAACG TAAAAGTTAA CAGTCAAACT
GGCTTATATG AGGTTGAAGA TAAAAATGGA AATGGAATAG TCTTAGATGA TACTGGGGAT
AGGTATATTA CTAAATTCCT TGGTCAGTAT TCTTATGGAG GATTACAAAA TTCGATAAAA
TATAAACAAT TTAATTTAGA TTTTCTTTTT GCATTTTCAA AGCAAAATGG CCGAAATTAT
AGATTTACGG TTCCTATAAA TGCGGGCAGA TGGCTAACTG GAAACCAATT AACAAATCAG
CCGTCTATCG TTTTGAATAG GTGGCAAAAC CCTAATGATG AAGCAAATGT TCAACGATTT
GGTACTACGT CTGTTACGAA CACAGCAAAT TCAGCCTCCA GAGATTTTGG AAATACTTCG
GTGGTTGATG CTTCATTTAT TAAGCTAAGA AATATTTCAC TATCATATTC TCTTCCCAAG
AACTTACTTT CAAAAATTAA ATTAAATAAT GTATTGCTTA GCCTGCAAGG GCAGAATATT
TTCACAATAA CCGACTACAT AGGATTGGAT CCTGAGACTC AAGCTTTCAC AAATTTACCC
CCGCTACGAA CATTAGCAAT GGGGATTAGT GCAACATTTT AA
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| Protein sequence | MYKNYIIKPD IPKRYVYKIL LVMRLTTVIL IASMLQVSAS SLAQKFSYVK KDVPLLQVFK
ELKKQTGYNI LWNEKEINVT TLIDANFKKS SIEEVMDACL GQLPFSYTIN DKMVLIKQKE
LSFRDKITSF LAAIDVRGRV LDENDAPLVG AVVKVKGTKQ ATSTNNNGDF VMNGVDEKAT
LVVSFLGYEA KEIAASKNVG SIRLTLNTDR LEEVQINAGY YTVNDRERTG NISRVTAKEI
EKQPVNNVVA ALQNRVPGLQ IVQQTGVPGG GFTVQIRGRS SINSFVGNLP LYIIDGVIYP
STTVSANSTI GIFGGKTGYG ASPLSSLNPG DIESIEILKD ADATAIYGSR GANGVILITT
KKGISGLTKV RANVSQGYSE VGHRIDLLNT QEYLEMRREA FKNDGLSPST TDYDINGTWD
QNKYTDWQKT FIGNKAHNTN ASLGVTGGNE KSNYLIAGSY SKEGTVFPGN FGIDKAGISS
SINLGTPSER FNANFSASFN HIKQNLLNTD LTIYMFLTPN FPDLRDQYGQ LNYSNNTISL
NPLVFLSQPN NANMNTLIGN VSLSYKFLKN LVFKTALGYS SILRTEFVKF PLAAINPAQN
PTSESRMSLF SDNHNDTFML EPQIAYNGDF LGGKIEILGG MSLQKNDAQF RTIQASNYSS
DEIMDNISGA ALLTNLGATN SEYKYIAGFG RFNYKLLDKY FINLTARRDG SSRFGKDKQF
ANFGAVGAAW IISEENFLKK IPFITFAKLR ASYGITGNDQ IGNYGYLQLW TSTGTYQGKT
TVTASGAAPN PDFSWETNKK AEAAIQLGFL EDMINLEISY YRNRSSSQLL SKTLPPSTGL
TSLSGNLPGI VQNNGWEFNS TFKIINTSNW NWSLGFNLTI PKNKLVSYPG LGTSSDAINY
QIGEPLNILK TSNVKVNSQT GLYEVEDKNG NGIVLDDTGD RYITKFLGQY SYGGLQNSIK
YKQFNLDFLF AFSKQNGRNY RFTVPINAGR WLTGNQLTNQ PSIVLNRWQN PNDEANVQRF
GTTSVTNTAN SASRDFGNTS VVDASFIKLR NISLSYSLPK NLLSKIKLNN VLLSLQGQNI
FTITDYIGLD PETQAFTNLP PLRTLAMGIS ATF
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