| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1609 |
|---|
| Symbol | |
|---|
| ID | 8252711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1907272 |
|---|
| End bp | 1908321 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644935263 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_003091884 |
|---|
| Protein GI | 255531512 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00228906 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACTG AAACCAAAGC GCAGGCTTGT TTAACTGCAG ACCTTACGGA TAAATTTGAA
CACTTGTGGC ATCTGGTGGG CAATACGCCC ATGCTTGAAC TCCAGTATAC ATACAAAGGA
AAAGCGGGAA AAGTGTATGT AAAATGCGAA CATTATAACC TTACCGGAAG TGTGAAAGAC
AGAATGGCGC TGAACATTAT GTATGAAGCT TACAGATCAT GTGCAATTAA ACCTGGTGAT
ACCATTATTG AAGCTACAAG TGGCAATACA GGAATAGCAT TTGCGGCTAT TGGCCGGGCC
CTGGGCCATC CGGTGAAGAT CATTATGCCA AACTGGTTGA GCAAGGAGCG TATTGATATC
ATCAGGAGCA TGGGTGCCGA AGTAATTTTG ATCAGTAAGG AAGAAGGTGG TTTTTTGGGC
AGCATTAAAA TGTGTGAGGA CCTTGCTGCT GCCGGAAGGG TTTTCCTGCC CAGACAATTT
GAAAACCAGT ATAATGGAGA AGCCCATGAG AAAACCACGG GTATGGAGAT CTGGGAGCAA
TTGAAATTAA AGGGATTAAG ACCTGATGCT TTTGTAGCAG GGGTTGGAAC AGGGGGGACG
GTAATGGGCG TTGGAAAAGG GCTGCGATCA CATCATGCCG CTATCAAAAT CCATCCACTG
GAACCCGCTG AAAGTCCGAC CTTAACCACA GGATATAAAG TTGGTACCCA CCGTATACAA
GGAATTTCTG ACGAATTTAT CCCCGCTATA GTGAAGCTGG ATGAACTGGA TGAGGTTGTC
CAGGCCCATG ATGGCGATGC GATCATTATG GCACAAAAGC TGGCTAAGGA ACTTGGCCTG
GCAGTAGGGA TCTCTTCGGG TGCAAATGTG ATCGGTGCCA TTAAATTAAA AGAACAAATG
GGTGCCGATG CAGTGGTGGT TACCTTGTTG TCGGACAGCA ACAAAAAGTA TTTAAGTACC
GATCTTGTGA AAGAAGAGCC GGTTAAGGCT TTATATGTAT CTACAGATAC TGTGTTTACT
GGCTACCAGC CAATTTGCAG ACTAAAATAA
|
|---|
| Protein sequence | MLTETKAQAC LTADLTDKFE HLWHLVGNTP MLELQYTYKG KAGKVYVKCE HYNLTGSVKD
RMALNIMYEA YRSCAIKPGD TIIEATSGNT GIAFAAIGRA LGHPVKIIMP NWLSKERIDI
IRSMGAEVIL ISKEEGGFLG SIKMCEDLAA AGRVFLPRQF ENQYNGEAHE KTTGMEIWEQ
LKLKGLRPDA FVAGVGTGGT VMGVGKGLRS HHAAIKIHPL EPAESPTLTT GYKVGTHRIQ
GISDEFIPAI VKLDELDEVV QAHDGDAIIM AQKLAKELGL AVGISSGANV IGAIKLKEQM
GADAVVVTLL SDSNKKYLST DLVKEEPVKA LYVSTDTVFT GYQPICRLK
|
|---|
| |