| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1588 |
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| Symbol | |
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| ID | 8252690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1877335 |
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| End bp | 1878459 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935242 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003091863 |
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| Protein GI | 255531491 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.357687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0606442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTG CCGAATTATT ACAAAGGGCT TTGCACTTCG ACTTTCTAAC CAAAGAAGAG
GGTGTGTTTT TATATCATCA TGCAGCAACA GCTGAACTGG CTTATGTGGC CAATGAATTG
AGAAAAAAGC AGGTACCAAG TGGAAAAGTG ACCTGGCAGA TAGACAGGAA CGTCAATACC
ACCAATGTAT GTATTGCCAA CTGTAAATTC TGTAATTTCT TCAGGCGCCC GGGCCACGAG
GAAAGTTATA TTACCGATAT TGAAACCTAT AAGCAAAAAA TAGAAGAGAC ATTCAGGCTG
GGCGGCGACC AGCTGCTCTT ACAGGGTGGC CACCACCCTG AGCTGGGCCT GAAATTCTAT
GCAGACCTGT TTAAACAGCT GAAAGAATTG TATCCCGACC TGAAGCTGCA TGCGCTTGGT
CCGCCCGAAA TTGCGCATGT AGCCAAGCTG GAAGGGCTTT CACATACTGA AGTTTTAACT
GCCCTAAAAG CAGCTGGCAT GGATTCTTTG CCCGGGGCCG GTGCAGAAAT TTTGAACGAC
AGGGTGAGAA GGCTGATCTC TAAAGGAAAA TGCGGGGGTC AGGAATGGCT GGATGTCATG
CGGGCAGCGC ACCAGCTGCA CATTACCACT TCGGCAACCA TGATGTTTGG TCATGTAGAA
ACCATAGAAG AGCGTTTTGA GCACCTGGTA TGGATCAGGG AGGTACAAAG TGAAAAACCG
GCTGATGCCA AGGGTTTTCT GGCTTTTATT CCATGGCCTT TCCAGGATGA TGGTACCTTG
CTGAAACGTT TAAGGGGTAT CAGCAACAAT GTTTCGGGCG ATGAATACAT CAGGATGCTG
GCTTTAAGCC GCATCATGCT GCCCAACATC AAAAATATAC AGGCATCCTG GCTTACAGTG
GGCAAAAATG TGGCAGAACT TTGTCTGCAT GCCGGGGCAA ATGATTTTGG TTCCATTATG
ATTGAAGAAA ATGTGGTATC TGCTGCCGGT GCCCCGCATC GTTTTACAGC AAAAGGCATA
CAGGATGCGA TCAGGGAAGC CGGATTTGAG CCACAGTTAA GGGGGCAGCA GTACAACTAC
CGCGACCTGC CCGATCACCT GGAAGAGCAG GTGATCAATT ACTAA
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| Protein sequence | MNTAELLQRA LHFDFLTKEE GVFLYHHAAT AELAYVANEL RKKQVPSGKV TWQIDRNVNT
TNVCIANCKF CNFFRRPGHE ESYITDIETY KQKIEETFRL GGDQLLLQGG HHPELGLKFY
ADLFKQLKEL YPDLKLHALG PPEIAHVAKL EGLSHTEVLT ALKAAGMDSL PGAGAEILND
RVRRLISKGK CGGQEWLDVM RAAHQLHITT SATMMFGHVE TIEERFEHLV WIREVQSEKP
ADAKGFLAFI PWPFQDDGTL LKRLRGISNN VSGDEYIRML ALSRIMLPNI KNIQASWLTV
GKNVAELCLH AGANDFGSIM IEENVVSAAG APHRFTAKGI QDAIREAGFE PQLRGQQYNY
RDLPDHLEEQ VINY
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