Gene Phep_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1584 
Symbol 
ID8252686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1873834 
End bp1874748 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content37% 
IMG OID644935238 
Producthistidine kinase internal region 
Protein accessionYP_003091859 
Protein GI255531487 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0238683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATA AACGGCTAAA CTTGACAGGA AAGTTTTTAA CCCTTGTAAT TCTGTTGTTG 
ACAAACAGCT CCCGAACCTA TGCTCAGATT ACAAATTTAC TGCAGGAAAA AATAAACAGT
GGCCACAGGA ATATTTCTGC AATAGTTAAT TTTTCATTAA AAAAAAACTT TTGGGAAACA
ACTTTGGTTT TGGCGGGCAT TTTTTTGCTG GCTGGCGTTA TTTACAAGAT AGCAGTGGTG
GTTACTAAAA TTCAGAAAAA CAAGGAGCAG GAACAACTAC TTTTAAAAAA CAAGATATTA
ATGCTCGAAC TACGCTCATT ACAGATGATG ATGAACCCTC ATTTTGTTTT TAATGTAATG
AATTCCATTC AGCATTACAT CAACACAAAG GATAGCAATT CAGCAAATAA GATACTCACC
GGCTTTGCAA AGCTAATCAG GATGAACCTG GAGATCTGTA CAAAAAGCTT CATCAGTCTG
TACGAGGAGC TCGAATACCT TGAGCTCTAT CTTAGTCTGG AGAAAAAAAG ACTCGGTGAA
AAGTTTAAGT ACCACATATA CCTGCAAAAC ACAATTGATA AAGAAGAGAC ATTAATTCCT
TCTATGATCC TTCAACCCTA TATAGAAAAT GCGATATGGC ATGGCTTAAT GCCCAAAGAA
GATGGTGGCA AACTGGACAT ACGAATAGCT TTTAAAGGAG AAGATCACCT GGTGATTGAA
ATCATCGACG ATGGCATTGG TATCGACAAT TCTATGAAAA GTAAAAAAGG TCATCACATC
AGCAAAGGCA TGAGCCTTAC GCGGGAACGC ATTAACCTTT TAAATCAAGT TGAGCCAAAT
CCAATACGGA TTGATGTTAA GCAAAACGGT ATTTCGGGCA CTTTTGTATC TATTCTCATC
CCATTAAAAA GATAA
 
Protein sequence
MINKRLNLTG KFLTLVILLL TNSSRTYAQI TNLLQEKINS GHRNISAIVN FSLKKNFWET 
TLVLAGIFLL AGVIYKIAVV VTKIQKNKEQ EQLLLKNKIL MLELRSLQMM MNPHFVFNVM
NSIQHYINTK DSNSANKILT GFAKLIRMNL EICTKSFISL YEELEYLELY LSLEKKRLGE
KFKYHIYLQN TIDKEETLIP SMILQPYIEN AIWHGLMPKE DGGKLDIRIA FKGEDHLVIE
IIDDGIGIDN SMKSKKGHHI SKGMSLTRER INLLNQVEPN PIRIDVKQNG ISGTFVSILI
PLKR