| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1569 |
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| Symbol | prmA |
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| ID | 8252671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1852591 |
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| End bp | 1853427 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935223 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_003091844 |
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| Protein GI | 255531472 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.641228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.177131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACA TACAGGTAAC TTTCAGCTTT ACAGCTATTG AAGAATATCA GCAGGACCTT
TTGATTGCTG ATCTGGCTGA TATCGGTTTC AATACTTTTG AAGATACAGC CAATGGGTTT
ATAGCATTTG CAGCGGCCGG TACTTACGAT GAAGATCAGT TGAAAAGTCT GCTGGAACAG
TACGAAGGGC AATTTCAGTA CACTTATACG GTTGCTGAAA TTGCCGGTAA AAACTGGAAT
GAAGAGTGGG AAAAGAATTT TGAACCACTT ATCATAGCCG ATCAGTGTTA TGTACGTGCA
ACTTTTCATC AGTCACAGCC ACAATATAAA TATGAAATTG TCATTGATCC GAAAATGGCC
TTTGGTACAG GACACCATCA AACCACAACG ATGATGATCC AGTACCTGCT GGATGCAGAT
GTAGAGGATA AAACAGTGCT CGATATGGGC TGTGGTACAG CAATACTTGC TATTTTAGCA
GCTAAAAAAG GGGCTGCCAG GTTGGTAGCT ATAGACAATG ATGAAGTTTG TTACCAGAGT
ACCATCGAAA ATGCTGCATT AAACAACATC CGAAATATTG AGGCCCTTTG TGGAAGTAAA
GAGGCTATCC CCGAAATAGC TTTTGATGTT ATCCTGGCCA ATATCAACCG CAATATTCTG
CTCGATCAGA TCCCTTCTTA TGCTGCCATC TTAAAAAAAC AGGGTAATAT TTTCTTTAGT
GGATTTTACG AATCACCAGA TCTGGATATG ATAAAAGCTG CCTGTGAACC TTTTGGGATC
AAATATGTTG ATCATAAAAA GATTGGCGAC TGGGTGGCAG CTTATTTTAC TAAATAG
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| Protein sequence | MQYIQVTFSF TAIEEYQQDL LIADLADIGF NTFEDTANGF IAFAAAGTYD EDQLKSLLEQ
YEGQFQYTYT VAEIAGKNWN EEWEKNFEPL IIADQCYVRA TFHQSQPQYK YEIVIDPKMA
FGTGHHQTTT MMIQYLLDAD VEDKTVLDMG CGTAILAILA AKKGAARLVA IDNDEVCYQS
TIENAALNNI RNIEALCGSK EAIPEIAFDV ILANINRNIL LDQIPSYAAI LKKQGNIFFS
GFYESPDLDM IKAACEPFGI KYVDHKKIGD WVAAYFTK
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