Gene Phep_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1543 
Symbol 
ID8252645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1829766 
End bp1829924 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content43% 
IMG OID644935197 
Productribosomal protein L34 
Protein accessionYP_003091818 
Protein GI255531446 
COG category 
COG ID 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.185024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA CATTCCAACC TTCGCAAAGA AAGAGAAGAA ACAAGCATGG CTTCCGCGAA 
AGAATGGCTA CAGCAAACGG TAGAAGGGTA TTAGCTTCCC GTCGTGCAAA AGGAAGAAAA
AGATTAACGG TTTCAAGCGA AGGCCGTCAC AAAGCATAA
 
Protein sequence
MKRTFQPSQR KRRNKHGFRE RMATANGRRV LASRRAKGRK RLTVSSEGRH KA