Gene Phep_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1533 
Symbol 
ID8252635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1821342 
End bp1822085 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content43% 
IMG OID644935187 
Producthypothetical protein 
Protein accessionYP_003091808 
Protein GI255531436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.952561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.969603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA CGCTTTTTAC CTGCCTGGCC CTATTGTTGC CTGTTTTGCC CCTGCTGGCG 
CAGAGTTCCT TTGTAAAGCC TGTAATTTTT GGCTTAAAAG GAGGTCTAAA TGCCTCATTT
TTTACAAAAG ACGTTGATCT TTTTGATCCT GCGAGTTCAG GGAATGATCC TTCTTTTCGG
CGGTTTTTGC GTGCGGCGGC TTTTGCAGGG ATTACAGTGG ATTATATGGT AGGTGAACGT
TTTTCAGTTG GTGCAGAAGT TTTATACAAC GCGAGGGGGA TGGCTTACCG TCAAAAGAAC
AACAGTGTGA TCATGATTGG TCAAAACGGG GCAGAACAGG CTTATAATTA TTTCAAATAT
AAAGTGGATT ATTTAGAACT GCCTTTAACA GCGGGGTACA ATGTATTACC GGTTGCATCT
GATAACTGGC TGACCGGCTA TGTGGGCCTG GCACCTGCTA TTGCCATAAA TAAAGCTGTT
AAATTGGATT ACCCTAAGCC AAATGCAGGG CCATGGGAAG GACAGGCCGA TAAATCTGGA
AACCTGGACG GTGTACGTAC TTTTAATACC AGCATGCTTG CAGGTATTCA ATTCGGTGGA
GTACCCTCGT TTGTTGGAGC CTATGCCGAT CTTCGTGCCA GCTATACCCT GTTTCCAGTT
TTTACGGAAA ATAACAGTTT AAGCGGTAAC AATTTAAATA CAAGAATGCT CAGTTTTTCA
TTCGGCATAG GACTTAAATT TTAA
 
Protein sequence
MRKTLFTCLA LLLPVLPLLA QSSFVKPVIF GLKGGLNASF FTKDVDLFDP ASSGNDPSFR 
RFLRAAAFAG ITVDYMVGER FSVGAEVLYN ARGMAYRQKN NSVIMIGQNG AEQAYNYFKY
KVDYLELPLT AGYNVLPVAS DNWLTGYVGL APAIAINKAV KLDYPKPNAG PWEGQADKSG
NLDGVRTFNT SMLAGIQFGG VPSFVGAYAD LRASYTLFPV FTENNSLSGN NLNTRMLSFS
FGIGLKF