Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1533 |
Symbol | |
ID | 8252635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1821342 |
End bp | 1822085 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935187 |
Product | hypothetical protein |
Protein accession | YP_003091808 |
Protein GI | 255531436 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.952561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.969603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAAAA CGCTTTTTAC CTGCCTGGCC CTATTGTTGC CTGTTTTGCC CCTGCTGGCG CAGAGTTCCT TTGTAAAGCC TGTAATTTTT GGCTTAAAAG GAGGTCTAAA TGCCTCATTT TTTACAAAAG ACGTTGATCT TTTTGATCCT GCGAGTTCAG GGAATGATCC TTCTTTTCGG CGGTTTTTGC GTGCGGCGGC TTTTGCAGGG ATTACAGTGG ATTATATGGT AGGTGAACGT TTTTCAGTTG GTGCAGAAGT TTTATACAAC GCGAGGGGGA TGGCTTACCG TCAAAAGAAC AACAGTGTGA TCATGATTGG TCAAAACGGG GCAGAACAGG CTTATAATTA TTTCAAATAT AAAGTGGATT ATTTAGAACT GCCTTTAACA GCGGGGTACA ATGTATTACC GGTTGCATCT GATAACTGGC TGACCGGCTA TGTGGGCCTG GCACCTGCTA TTGCCATAAA TAAAGCTGTT AAATTGGATT ACCCTAAGCC AAATGCAGGG CCATGGGAAG GACAGGCCGA TAAATCTGGA AACCTGGACG GTGTACGTAC TTTTAATACC AGCATGCTTG CAGGTATTCA ATTCGGTGGA GTACCCTCGT TTGTTGGAGC CTATGCCGAT CTTCGTGCCA GCTATACCCT GTTTCCAGTT TTTACGGAAA ATAACAGTTT AAGCGGTAAC AATTTAAATA CAAGAATGCT CAGTTTTTCA TTCGGCATAG GACTTAAATT TTAA
|
Protein sequence | MRKTLFTCLA LLLPVLPLLA QSSFVKPVIF GLKGGLNASF FTKDVDLFDP ASSGNDPSFR RFLRAAAFAG ITVDYMVGER FSVGAEVLYN ARGMAYRQKN NSVIMIGQNG AEQAYNYFKY KVDYLELPLT AGYNVLPVAS DNWLTGYVGL APAIAINKAV KLDYPKPNAG PWEGQADKSG NLDGVRTFNT SMLAGIQFGG VPSFVGAYAD LRASYTLFPV FTENNSLSGN NLNTRMLSFS FGIGLKF
|
| |