| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1518 |
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| Symbol | |
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| ID | 8252619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1802232 |
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| End bp | 1802882 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935172 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003091794 |
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| Protein GI | 255531422 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.801994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACAG TTTTAGCACA AAAAATAAAA AATATTATTT TCGATTACGG CAATGTGATC
TTCGAAATAG ACTTTAAAAA GGCACAAGAA GCTCTATTAC AACTTGGTAT TGCCAATAAT
ACGGAATTCT TTTCACATAA AAGCCACCAC CAGCTTTTCA ATAATTTTGA AACCGCAGCC
ATCTCTCCTG CACAGTTCAG AGAAGGGATA CGTGAAGCAG CAGGTAATAA AAACCTGACA
GATCAGGAAA TTGACAATGC CTGGAACAGT TTGCTGATCG GTGTACCCCC CGGAATTCAT
GAGGTACTGC TTAAAGTAAA ACAAAAATAC CGTACCTTTT TACTGAGCAA TAACAATGAA
ACACATTACA ATTACATTGT AGAATATTTA AAAAAGGAAT TTGGGATGGA CGACAACAGC
GCACTGTTTG AAAAAGCCTA TTACTCACAG CAAATGTTCT TGCGCAAACC CAATATAGAG
ATATTTGAAC AGGTCATTCA AGAGAATGGA CTTGACCCTG CCGAAACCTT GTTTATTGAT
GATAGCCCAC AGCACATTGA GGGGGCCAAA TTAGCCGGTC TGCATACTTT ACTGATGACC
AGACACCCTA AAGAACTGGA ACAGGTTTTA ATAGCACATC ACATCCTATA A
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| Protein sequence | METVLAQKIK NIIFDYGNVI FEIDFKKAQE ALLQLGIANN TEFFSHKSHH QLFNNFETAA
ISPAQFREGI REAAGNKNLT DQEIDNAWNS LLIGVPPGIH EVLLKVKQKY RTFLLSNNNE
THYNYIVEYL KKEFGMDDNS ALFEKAYYSQ QMFLRKPNIE IFEQVIQENG LDPAETLFID
DSPQHIEGAK LAGLHTLLMT RHPKELEQVL IAHHIL
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